TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATCCGCGG
AATTCTCTAGTACTTCCCCAAAAGAATAACCACAACTAGCTGATTCGAGT
TGATCTAGGATCAAGTTGTCAAGGACAATAAAGAATGTGGCAAAGTGGGA
AGATGTTGTATAGTTAACAGAACTGAGTCTCAGACTGTAAGGAATAAGTG
CCCGCAAGGGATGCTTTTATAGGGATACACACAGTGGAAATTTTGCAATG
TGAAACAATTTTACTAATGGTCCAACTGAGTGTCACTGTTTATAAAAATT
ATAGTTTATCTTGTGCAGCAGATTCAACAACTCTTATTCTAGTAGAAAGG
CTCAAGGGTAAATCATAGGTGCTGAGGACCAGAAAAAGGCTAGGCTTAAG
AGGATTGGCTGTGTTTTCCTCCACTCTTGCTGCTCTACCATTTCCATTAA
ACCACACACCCAGAAGCCTGAGTGCAACTGCTCTAAATCCCCATTGGCAG
TCGAATTCCTGATGAATTTGGACAATGAAAAGTCAGAGGGGGAAACCTGA
AGTTTAGTTAAAGAAAGAAAATACTTTTTAATTTTTAATCAATTTGTTTC
ATGTGTATGGGCATTTTGCCAGCGTGTATATCTCTGGGCTATACTACATG
TATGCCTGGTACATGAGGAGGCCAGAAAAGGGTGTCAGGCTTCCTGGCAT
TGAAGTTATAGACAGTTGTGAGCTGTCA

CCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGATATTTCACAGGATTTATA
AATACTGGAGTCCTAATTGTTGGTTCCCCTCGTTGGTTCGTTGGTGGTTG
CCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCC
CTCCCCTCCCCCTTCCCCCTCCCCTTTCCCTTCCCCTCCCCCCCCCCCCC
CCCCTTCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCTCCCCTCCTCCCCC
CCCCTCCCCCCCTCCCCCCCCCCCCCTCTTTTCTCCCCCCCCCCCTCTTA
CCCCCCCCCCCCCCCCCCCCCCCCCTTCCCCCCCCCCCCCCCCCCCCCTC
TACCCATACACCCCCCCTCCACCCCCCCCCTCCCCCCCCCCCCCCCCCCC
CAAACCCCCAATTCCCTCACCTCCCCCCCCCCCCCCCTCCCCCCACCCCC
CCCCCTCCCTTCCCCCCACCCCCCCCCCCCCCCCTCCCCCCCCCCCACCC
CCCTCCCCCCCCCCACCTCCCTCCTACCCTCCCTCCCCTCCCACCCCCCC
CCTCCATACCCCCCCCCCCCCCCACCCACACCCCCCCCCCACCTCCCTCC
CCACCCTCCCCCTCCCCCCACCCTCCCCCCCCCCTCCCCCTCCCCCCCCC
AATCCCACAACACCCCACACCCCCCCTTCCCCACACCATTCCTACCCCCC
CCACACCCCCCACCACCCCCCTCCCTCCCCCACCCCCCCTCTCGCCACTC
CTACCCCTTCTCTCCCCCCCCCCCCCCACACCACACCCCACCATCCCCCC
ACCG

Query= MSMg01no261_h19.b1 MSMg01no261_h19.b1 CHROMAT_FILE:
MSMg01no261_h19.b1 PHD_FILE: MSMg01no261_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:53 2005
         (667 letters)



>mm_chr19_19385393_19386460
          Length = 1068

 Score = 1166 bits (603), Expect = 0.0
 Identities = 648/663 (97%), Gaps = 1/663 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggaattctctagtacttccccaaaagaataaccacaactagctgattcgagttgatctag 65
           |||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||
Sbjct: 750 ggaattctctagtactactgcaaaagaataaccacaactagctgattcaagttgatctag 691

                                                                       
Query: 66  gatcaagttgtcaaggacaataaagaatgtggcaaagtgggaagatgttgtatagttaac 125
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gatcaagttgtcaaggagaataaagaatgtggcaaagtgggaagatgttgtatagttaac 631

                                                                       
Query: 126 agaactgagtctcagactgtaaggaataagtgcccgcaagggatgcttttatagggatac 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 630 agaactgagtctcagactgtaaggaataagtgcccgcaagggatgcttttataggcatac 571

                                                                       
Query: 186 acacagtggaaattttgcaatgtgaaacaattttactaatggtccaactgagtgtcactg 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 acacagtggaaattttgcaatgtgaaacaattttactaatggtccaactgagtgtcactg 511

                                                                       
Query: 246 tttataaaaattatagtttatcttgtgcagcagattcaacaactcttattctagtagaaa 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tttataaaaattatagtttatcttgtgcagcagattcaacaactcttattctagtagaaa 451

                                                                       
Query: 306 ggctcaagggtaaatcataggtgctgaggaccagaaaaa-ggctaggcttaagaggattg 364
           ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 450 ggctcaagggtaaatcataggtgctgaggaccaaaaaaaaggctaggcttaagaggattg 391

                                                                       
Query: 365 gctgtgttttcctccactcttgctgctctaccatttccattaaaccacacacccagaagc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gctgtgttttcctccactcttgctgctctaccatttccattaaaccacacacccagaagc 331

                                                                       
Query: 425 ctgagtgcaactgctctaaatccccattggcagtcgaattcctgatgaatttggacaatg 484
           ||||||| ||| |||||||  |||||||||||||||||||||||||| ||||||||||||
Sbjct: 330 ctgagtgtaaccgctctaaggccccattggcagtcgaattcctgatggatttggacaatg 271

                                                                       
Query: 485 aaaagtcagagggggaaacctgaagtttagttaaagaaagaaaatactttttaattttta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaaagtcagagggggaaacctgaagtttagttaaagaaagaaaatactttttaattttta 211

                                                                       
Query: 545 atcaatttgtttcatgtgtatgggcattttgccagcgtgtatatctctgggctatactac 604
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 atcaatttgttttatgtgtatgggcattttgccagcgtgtatatctctgggctatactac 151

                                                                       
Query: 605 atgtatgcctggtacatgaggaggccagaaaagggtgtcaggcttcctggcattgaagtt 664
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 150 atgtatgcctggtacatgaggaggccagaagagggtgtcaggcttcctggcattgaagtt 91

              
Query: 665 ata 667
           |||
Sbjct: 90  ata 88


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1068
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1058
Effective search space:   695106
Effective search space used:   695106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)