Query= MSMg01no263_n20.b1 MSMg01no263_n20.b1 CHROMAT_FILE:
MSMg01no263_n20.b1 PHD_FILE: MSMg01no263_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:54 2005
(572 letters)
>mm_chr19_60305159_60306129
Length = 971
Score = 1054 bits (545), Expect = 0.0
Identities = 563/569 (98%), Gaps = 1/569 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttttgttcgctgctaaatctctgattgatggaaatgttctccaaatataatg 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttttggtagctgctaaatctctgattgatggaaatgttctccaaatataatg 263
Query: 64 aagtccctcaactcatttctcatttggataaaatgaataatactttgttgaacatgtaat 123
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 264 aagtccctcaact-atttctcatttggataaaatgaatactactttgttgaacatgtaat 322
Query: 124 aaatgtgattcttgctgaaactgagaaagaataattaactttcctctatacaaagtactt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aaatgtgattcttgctgaaactgagaaagaataattaactttcctctatacaaagtactt 382
Query: 184 ctttttcaaaattgcaaaaatatggtctcctgacttatgtagagaaattgaaaccaggga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctttttcaaaattgcaaaaatatggtctcctgacttatgtagagaaattgaaaccaggga 442
Query: 244 gttctaaatctcataattatgttgctatccatcatgatcgagaaataacaatttatctgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gttctaaatctcataattatgttgctatccatcatgatcgagaaataacaatttatctgg 502
Query: 304 ttttcttttctacatttttcagagaaaaacatttataaacaatgttaagcctttcaagaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttttcttttctacatttttcagagaaaaacatttataaacaatgttaagcctttcaagaa 562
Query: 364 tacaattaacaaccaacactataatatctgcaagaactgacatctgaggaaagaaatgtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tacaattaacaaccaacactataatatctgcaagaactgacatctgaggaaagaaatgtt 622
Query: 424 ctgtaatatagggtattccttataccaagaagcaccttttacttattgttcatgtctaat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctgtaatatagggtattccttataccaagaagcaccttttacttattgttcatgtctaat 682
Query: 484 acttttaaattcttcaggtctaatggggaaagacaacagaagagggaagtttaaggagta 543
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 actttcaaattcttcaggtctaatggggaaagacaacagaagagggaagtttaaggagta 742
Query: 544 tttgtgtatgtttatattttgcctttagt 572
||||||||||||||||||||||||||||
Sbjct: 743 cttgtgtatgtttatattttgcctttagt 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 971
Length adjustment: 10
Effective length of query: 562
Effective length of database: 961
Effective search space: 540082
Effective search space used: 540082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_n20.g1 MSMg01no263_n20.g1 CHROMAT_FILE:
MSMg01no263_n20.g1 PHD_FILE: MSMg01no263_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:54 2005
(241 letters)
>mm_chr19_60462361_60463001
Length = 641
Score = 453 bits (234), Expect = e-132
Identities = 239/241 (99%)
Strand = Plus / Minus
Query: 1 tgatttttctgttgctctgtttgttttagtcaggactgactctagnaccctactactttt 60
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 441 tgatttttctgttgctctgtttgttttagtcaggactgactctagcatcctactactttt 382
Query: 61 gggtggaatctgtccttgatttcccaattagaatgaactgtatatccagagccacttatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtggaatctgtccttgatttcccaattagaatgaactgtatatccagagccacttatg 322
Query: 121 attggttcagataaaagcatgtggtttcaaatgggcctagagtctgccctaggctttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attggttcagataaaagcatgtggtttcaaatgggcctagagtctgccctaggctttttt 262
Query: 181 tttttcaccagaagctgcaatagaaatatttaacttttttcctctggaattgccacaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttcaccagaagctgcaatagaaatatttaacttttttcctctggaattgccacaggg 202
Query: 241 a 241
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
