Query= MSMg01no265_o21.b1 MSMg01no265_o21.b1 CHROMAT_FILE:
MSMg01no265_o21.b1 PHD_FILE: MSMg01no265_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:35 2005
(290 letters)
>mm_chr19_10275055_10275743
Length = 689
Score = 534 bits (276), Expect = e-156
Identities = 285/288 (98%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 attgctgatgtggcccccagtgccatccgtgagaatgacatcaagagctactcttggtcg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 487 attgctgatgtggcccccagtgccatccgtgagaatgacatcaagagctact-ttggtcg 429
Query: 61 caaagtggccatcgatgcctccatgagcatctaccagttcctgattgctgttcgtcaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 caaagtggccatcgatgcctccatgagcatctaccagttcctgattgctgttcgtcaggg 369
Query: 121 tggggatgtgctgcagaacgaggagggtgagaccaccagccacctgatgggcatgttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tggggatgtgctgcagaacgaggagggtgagaccaccagccacctgatgggcatgttcta 309
Query: 181 ccgtaccatccgcatgatggagaatggcatcaagcctgtgtacgtctttgatggcaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ccgtaccatccgcatgatggagaatggcatcaagcctgtgtacgtctttgatggcaaacc 249
Query: 241 accacagctgatttcaggcgagctggccaagcgcagtgagaggcgcgc 288
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 248 accacagctgaagtcaggcgagctggccaagcgcagtgagaggcgcgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no265_o21.g1 MSMg01no265_o21.g1 CHROMAT_FILE:
MSMg01no265_o21.g1 PHD_FILE: MSMg01no265_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:35 2005
(288 letters)
>mm_chr19_10122322_10123009
Length = 688
Score = 553 bits (286), Expect = e-162
Identities = 286/286 (100%)
Strand = Plus / Plus
Query: 1 tttggaactgtagttactgatacttgtgagccaccacatgtaggtgctggaaactcaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggaactgtagttactgatacttgtgagccaccacatgtaggtgctggaaactcaacc 260
Query: 61 tggatcctctgcaaaacaagccattgttcttaatcactgagtcatctctctagccgtatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggatcctctgcaaaacaagccattgttcttaatcactgagtcatctctctagccgtatg 320
Query: 121 gcctgccttttgactccagcactttctacccactcttatctgagacttaatgattttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctgccttttgactccagcactttctacccactcttatctgagacttaatgattttcaa 380
Query: 181 tttcattcattttgactcttctaaaatgtgtgtgttgggcgcgatcacaaagtttgacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcattcattttgactcttctaaaatgtgtgtgttgggcgcgatcacaaagtttgacac 440
Query: 241 acataccccttaacctttctgagtcttcccttccctcacttttagt 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acataccccttaacctttctgagtcttcccttccctcacttttagt 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
