Query= MSMg01no270_e09.b1 MSMg01no270_e09.b1 CHROMAT_FILE:
MSMg01no270_e09.b1 PHD_FILE: MSMg01no270_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:53 2005
(318 letters)
>mm_chr19_22227515_22228232
Length = 718
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%)
Strand = Plus / Plus
Query: 7 attctacagcagttcacacaaactgcaacaaggggcctgtgaactatgccataggacaga 66
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 207 attctacagcagttcacacaaactgcaacaaggggcctgtgaaccatgtcataggacaga 266
Query: 67 aatctgaacactagatttgtagagagctatgagaaccaagaccaacaccaatgacttgga 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aatctgaacactagatttgtagagagctatgagaaccaagaccaacaccaatgacttgga 326
Query: 127 tgctgatatgtgagggagagagagaccattccctttgacgctcctgggttcatggaactc 186
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgctgatgtgtgagggagagagagaccattccctttgacgctcctgggttcatggaactc 386
Query: 187 atgataaagaactgtggtgaaccatgtcacagcttacagatacaagtgggtaatgaggtt 246
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 387 atgataaagaactgtggtgaaccatgtcacagcttacagatacaagtgggtaataaggtt 446
Query: 247 gtcaactctatacattatattttttattgtctttttatgattttataacatcatctctcc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gtcaactctatacattatattttttattgtctttttatgattttataacatcatctctcc 506
Query: 307 ccacaggttata 318
||||||||||||
Sbjct: 507 ccacaggttata 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_e09.g1 MSMg01no270_e09.g1 CHROMAT_FILE:
MSMg01no270_e09.g1 PHD_FILE: MSMg01no270_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:53 2005
(351 letters)
>mm_chr19_22391364_22392114
Length = 751
Score = 661 bits (342), Expect = 0.0
Identities = 350/354 (98%), Gaps = 3/354 (0%)
Strand = Plus / Minus
Query: 1 aaagcctcttggcaaatgaaccctgtctgggatttttgaaccagacagagagggcatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aaagcctcttggcaaatgaaccctgtctgggatttttgaaccagacagagagggcatcct 514
Query: 61 cttcaagcagtgtctggcatagaaagcatcgatgtatttttttctttttctttttctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cttcaagcagtgtctggcatagaaagcatcgatgtatttttttctttttctttttctttt 454
Query: 121 cttttcttttcctctatcttcagcaacaaagacatcaagaaaatagatatagcatgtaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cttttcttttcctctatcttcagcaacaaagacatcaagaaaatagatatagcatgtaga 394
Query: 181 gaaactgacactattttacaggtgaatataggtccatataaccaattctaaacattaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaaactgacactattttacaggtgaatataggtccatataaccaattctaaacattaaaa 334
Query: 241 aatattattattattac---tattattattattattattattgaaaaaagatagacttta 297
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aatattattattattactattattattattattattattattgaaaaaagatagacttta 274
Query: 298 agctggagggatggcttagttcataagtaacatccatgaacttaagccccagga 351
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 273 agctggagggatggcttagttcaaaagtaacatccatgaacttaagccccagga 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
