Query= MSMg01no276_c11.b1 MSMg01no276_c11.b1 CHROMAT_FILE:
MSMg01no276_c11.b1 PHD_FILE: MSMg01no276_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:02 2005
(319 letters)
>mm_chr19_37652254_37652972
Length = 719
Score = 582 bits (301), Expect = e-171
Identities = 310/313 (99%)
Strand = Plus / Minus
Query: 4 ggaattcactacgtatcccagcctggccacaaacttgagatcttctgcttcagcatccca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggaattcactacgtatcccagcctggccacaaacttgagatcttctgcttcagcatccca 455
Query: 64 agtgctaggcttagacttgtgtatcaccaagtgcagtgtagaaaaatgttttaagaactt 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 agtgctaggcttagagttgtgtatcaccaagtgcagtgtagaaaaatgttttaagaactt 395
Query: 124 gtttacaacatattccttttttacataggatttttcttatgcgtcaggggtgaaagagtc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gtttacaacatattccttttttacataggatttttcttatgcgtcaggggtgaaagagtc 335
Query: 184 atgtgctttgggtcacacttaagcctctttccacaggaatcctgttttgttttgttttgc 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atgtgctttgggtcacacttaagcctctttccacaggaatcctgttttgttttgttttgt 275
Query: 244 tttgttttgttttgttttgttttattgagatgggacctagggctgaccaagtgatctgtc 303
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 274 tttgttttgttttgttttgttttattgagatgggacctggggctgaccaagtgatctgtc 215
Query: 304 catagctgccttc 316
|||||||||||||
Sbjct: 214 catagctgccttc 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_c11.g1 MSMg01no276_c11.g1 CHROMAT_FILE:
MSMg01no276_c11.g1 PHD_FILE: MSMg01no276_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:02 2005
(167 letters)
>mm_chr19_37514980_37515546
Length = 567
Score = 300 bits (155), Expect = 3e-86
Identities = 163/167 (97%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 1 tcattctttggttaaaatacctaaacatgacacctaaagagccttggtgtgtgcacgcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattctttggttaaaatacctaaacatgacacctaaagagccttggtgtgtgcacgcgt 260
Query: 61 gtgtttgccatagtgaatatgagagatggggtgcccaccttctagaatatacatttgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtttgccatagtgaatatgagagatggggtgcccaccttctagaatatacatttgtgc 320
Query: 121 tttctttgctggggctgtggggggcggggggggaggggagaagagga 167
||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 321 tttctttgctggggctgtggggggcgggggggg---ggaaaagagga 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space: 88881
Effective search space used: 88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
