TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGATCCGCGGAA
TTCTGCCATTGCTTCCAATGCTTCTATGAGAAGCTCAGACCATTTTTCCA
ATCAAAGCCAGATATGTGGCTTTGAATAAAATCATGTCCTGGGTGATAAA
TGTGCTGGTTTTAGTCTGCAGAGTGGTCCTAGCTCATGCATAAATATACC
TGGATCCTCATATACCTGCCTGTCCCCAGACTAACAAAAGACAACATGGC
TTTGACCTGAACATAAATGTGCTTTTAGGTAACAATCCCAGGGCTGGGCT
GAGAGCTTAGTTGGTCTCTTTCTTGACTAATAAGCATGAGGACCTGAGGT
CCATCTGTCTTGAAAATGCTCACTGCTCAGCCAGCCCATCCTACTTAGAG
AGCACCAGGCCACCGACATACCCTGTCTCAAAACACACAATGGTTCAATG
AAATGGCACTTGAAGCTGTCCTCTGACCTTCCCGTGTACATGGACACATA
TGCACATATACCCACGCACACACACGAACTTGCATGAATATGCATCACCA
CCCCACCACCACCCCACATACACAGACAAAAAGGAAACTCTAGACCAAAC
TGAAAAATCGCTCCATGTCTTCCAGCATAAATGAGGCTTGCCATTCCAGC
CAGGAACCCAAGAGGTTTAGCTGAACTATGACCCAGAGGACCCTGTGATA
TTTTCCTTCTGTGCCACATATGCAGATGGGCT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTCCCGAGATGAGGACCTTGAAC
TCCCTGCAATTCGAGGATTACTTCAGACTGGGCATCTTTCTAAACAGGCT
CCTGACTGGCTCTGACATCTAATAACAAAAGGCCAGGACAGGTGTCTTGC
ATTTCTAACTGAGAACAAAGAAGGGGGTCGCAGCATTATGATAACAAGGC
TATCTGGGTTGCTATGGGCTGTAGTTGTGTGTTCACACTTCCATAATAAA
CCTATTTTCAGGGGCTTATGATTCAACCATAAAAATCTGTTCCACGCTTG
AACTTGGCAGATTGCTAGTTATCACCCCCCCCCCTGCTTTCAGACATGTT
TTTGAAGAAGTGTTTTGCCCCCAGATAAAATAAACACTGACNAAGATATT
AGGGATTTGAAGGACCCTTCTTCTTTCATTGAAATCCAGAGAAAGCTAAT
CTATTTTCCCGGAGAAGGAGATTCGGCTTTGGGGAGCAGGTTTTCCAGAA
AGGTTGTCAAGTTAGAAAGAAGTTAAACACCAATCTGAAATGAATTAGAG
AGCATTAGACAATAATTAAACTGAAATTAGGGCATCATTTATTCATCAAG
CCATCACTAAGAAACAATCCAATCCTCGTAGACACCTTTGAAATATTTAG
ATATCTTACACACCTTTGCAAGAGGGAAGAGAACGATG

Query= MSMg01no291_d16.b1 MSMg01no291_d16.b1 CHROMAT_FILE:
MSMg01no291_d16.b1 PHD_FILE: MSMg01no291_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:58 2005
         (606 letters)



>mm_chr19_59760931_59761936
          Length = 1006

 Score = 1094 bits (566), Expect = 0.0
 Identities = 596/606 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaaatcatgtcctgggtgataaatgtgctggttttagtctgcagagtggtcctagctca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaaatcatgtcctgggtgataaatgtgctggttttagtctgcagagtggtcctagctca 260

                                                                       
Query: 61  tgcataaatatacctggatcctcatatacctgcctgtccccagactaacaaaagacaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcataaatatacctggatcctcatatacctgcctgtccccagactaacaaaagacaaca 320

                                                                       
Query: 121 tggctttgacctgaacataaatgtgcttttaggtaacaatcccagggctgggctgagagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggctttgacctgaacataaatgtgcttttaggtaacaatcccagggctgggctgagagc 380

                                                                       
Query: 181 ttagttggtctctttcttgactaataagcatgaggacctgaggtccatctgtcttgaaaa 240
           |||||||||| ||  |||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 381 ttagttggtcactcacttgactaataagcatgaggacctgaggtccatctgccatgaaaa 440

                                                                       
Query: 241 tgctcactgctcagccagcccatcctacttagagagcaccaggccaccgacataccctgt 300
           ||||||||| ||||||||||||||||||||||||||||||||||||  || | |||||||
Sbjct: 441 tgctcactggtcagccagcccatcctacttagagagcaccaggccaatgagagaccctgt 500

                                                                       
Query: 301 ctcaaaacacacaatggttcaatgaaatggcacttgaagctgtcctctgaccttcccgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcaaaacacacaatggttcaatgaaatggcacttgaagctgtcctctgaccttcccgtg 560

                                                                       
Query: 361 tacatggacacatatgcacatatacccacgcacacacacgaacttgcatgaatatgcatc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacatggacacatatgcacatatacccacgcacacacacgaacttgcatgaatatgcatc 620

                                                                       
Query: 421 accaccccaccaccaccccacatacacagacaaaaaggaaactctagaccaaactgaaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 accaccccaccaccaccccacatacacagacaaaaaggaaactctagaccaaactgaaaa 680

                                                                       
Query: 481 atcgctccatgtcttccagcataaatgaggcttgccattccagccaggaacccaagaggt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atcgctccatgtcttccagcataaatgaggcttgccattccagccaggaacccaagaggt 740

                                                                       
Query: 541 ttagctgaactatgacccagaggaccctgtgatattttccttctgtgccacatatgcaga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttagctgaactatgacccagaggaccctgtgatattttccttctgtgccacatatgcaga 800

                 
Query: 601 tgggct 606
           ||||||
Sbjct: 801 tgggct 806


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space:   593616
Effective search space used:   593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no291_d16.g1 MSMg01no291_d16.g1 CHROMAT_FILE:
MSMg01no291_d16.g1 PHD_FILE: MSMg01no291_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:58 2005
         (283 letters)



>mm_chr19_59813685_59814367
          Length = 683

 Score =  540 bits (279), Expect = e-158
 Identities = 282/283 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attcccgagatgaggaccttgaactccctgcaattcgaggattacttcagactgggcatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 483 attcccgagatgaggaccttgaactccctgcaattcgaggattacttaagactgggcatc 424

                                                                       
Query: 61  tttctaaacaggctcctgactggctctgacatctaataacaaaaggccaggacaggtgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tttctaaacaggctcctgactggctctgacatctaataacaaaaggccaggacaggtgtc 364

                                                                       
Query: 121 ttgcatttctaactgagaacaaagaagggggtcgcagcattatgataacaaggctatctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttgcatttctaactgagaacaaagaagggggtcgcagcattatgataacaaggctatctg 304

                                                                       
Query: 181 ggttgctatgggctgtagttgtgtgttcacacttccataataaacctattttcaggggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggttgctatgggctgtagttgtgtgttcacacttccataataaacctattttcaggggct 244

                                                      
Query: 241 tatgattcaaccataaaaatctgttccacgcttgaacttggca 283
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tatgattcaaccataaaaatctgttccacgcttgaacttggca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space:   184676
Effective search space used:   184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)