MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-331J08
Chromosome	19 (Build37)
Map Location	59,592,358 - 59,592,843
singlet/doublet	singlet
Overlap gene	none
Upstream gene	1700011F14Rik, Pnlip, Pnliprp1, Pnliprp2, 1700019N19Rik, Hspa12a, 6430537H07Rik, 4930506M07Rik, LOC668626, Vax1, LOC668627, Kcnk18, Slc18a2, Pdzd8, LOC100034727, LOC100043073, Emx2os, Emx2
Downstream gene	Rab11fip2, LOC100043087, LOC100043091, LOC100043093, D19Ertd737e, 4933412A08Rik, Prlhr
Link	Open Mouse BAC browser

Click to get alignment info.

name	1700011F14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75645 MGI:1922895
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pnlip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69060 MGI:97722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pnliprp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18946 MGI:97723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pnliprp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18947 MGI:1336202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700019N19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67507 MGI:1914757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspa12a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73442 MGI:1920692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6430537H07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226265 MGI:2441717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930506M07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71653 MGI:1918903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668626 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 985 ESTs, 2 Proteins pseudo : _no_value

name	Vax1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22326 MGI:1277163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668627 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Kcnk18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:332396 MGI:2685627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc18a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214084 MGI:106677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdzd8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107368 MGI:2677270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100034727 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100034727
definition	note : ribosomal protein S12 pseudogene pseudo : _no_value

name	LOC100043073 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Emx2os (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329078 MGI:3052329
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Emx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13797 MGI:95388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab11fip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74998 MGI:1922248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043087 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043087
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043091 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043091
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 5 Proteins pseudo : _no_value

name	LOC100043093 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043093
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	D19Ertd737e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76539 MGI:1289174
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933412A08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74445 MGI:1921695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs

name	Prlhr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226278 MGI:2135956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700011F14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205447 GeneID:75645 MGI:1922895
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700011F14 gene transcript_id : NM_029372.2

name	Pnlip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476138 GeneID:69060 MGI:97722
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pancreatic lipase transcript_id : NM_026925.3

name	Pnliprp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803252 GeneID:18946 MGI:97723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pancreatic lipase related protein 1 transcript_id : NM_018874.2

name	Pnliprp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755117 GeneID:18947 MGI:1336202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pancreatic lipase-related protein 2 transcript_id : NM_011128.1

name	1700019N19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372226 GeneID:67507 MGI:1914757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700019N19 gene transcript_id : NM_026208.2

name	Hspa12a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388274 GeneID:73442 MGI:1920692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 12A transcript_id : NM_175199.3

name	6430537H07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802690 GeneID:226265 MGI:2441717
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6430537H07 gene transcript_id : NM_178689.3

name	4930506M07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383191 GeneID:71653 MGI:1918903
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930506M07 gene transcript_id : NM_175172.3

name	Vax1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678556 GeneID:22326 MGI:1277163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ventral anterior homeobox containing gene 1 transcript_id : NM_009501.1

name	Kcnk18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131054 GeneID:332396 MGI:2685627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel, subfamily K, member 18 transcript_id : NM_207261.3

name	Slc18a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353800 GeneID:214084 MGI:106677
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 18 (vesicular monoamine), member 2 transcript_id : NM_172523.2

name	Pdzd8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368577 GeneID:107368 MGI:2677270
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PDZ domain containing 8 transcript_id : NM_001033222.2

name	LOC100043073 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270529 GeneID:100043073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100043073 transcript_id : XM_001479446.1

name	Emx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119964699 GeneID:13797 MGI:95388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : empty spiracles homolog 2 (Drosophila) transcript_id : NM_010132.2

name	Rab11fip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351808 GeneID:74998 MGI:1922248
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB11 family interacting protein 2 (class I) transcript_id : NM_001033172.2

name	LOC100043087 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270531 GeneID:100043087
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043087 transcript_id : XM_001479465.1

name	D19Ertd737e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801818 GeneID:76539 MGI:1289174
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 19, ERATO Doi 737, expressed transcript_id : NM_029648.4

name	4933412A08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270583 GeneID:74445 MGI:1921695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs product : RIKEN cDNA 4933412A08 gene transcript_id : XM_001480761.1

name	Prlhr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476093 GeneID:226278 MGI:2135956
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prolactin releasing hormone receptor transcript_id : NM_201615.1

name	1700011F14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037425 GeneID:75645 MGI:1922895
definition	codon_start : 1 product : hypothetical protein LOC75645 protein_id : NP_083648.1

name	Pnlip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674236 CCDS:CCDS29930.1 GeneID:69060 MGI:97722
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004806 - triacylglycerol lipase activity [Evidence IEA] GO_process : GO:0030299 - cholesterol absorption [Evidence IMP]; GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 product : pancreatic triglyceride lipase protein_id : NP_081201.2

name	Pnliprp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9256628 CCDS:CCDS29931.1 GeneID:18946 MGI:97723
definition	codon_start : 1 product : pancreatic lipase related protein 1 protein_id : NP_061362.1

name	Pnliprp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755118 GeneID:18947 MGI:1336202
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004806 - triacylglycerol lipase activity [Evidence IEA] GO_process : GO:0006968 - cellular defense response [Evidence IMP]; GO:0007586 - digestion [Evidence IMP]; GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : pancreatic lipase-related protein 2 protein_id : NP_035258.1

name	1700019N19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385716 GeneID:67507 MGI:1914757
definition	codon_start : 1 product : hypothetical protein LOC67507 protein_id : NP_080484.1

name	Hspa12a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28461135 GeneID:73442 MGI:1920692
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006457 - protein folding [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : heat shock 70kDa protein 12A product : heat shock protein 12A protein_id : NP_780408.1

name	6430537H07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520085 GeneID:226265 MGI:2441717
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC226265 protein_id : NP_848804.1

name	4930506M07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424776 GeneID:71653 MGI:1918903
definition	codon_start : 1 product : hypothetical protein LOC71653 protein_id : NP_780381.1

name	Vax1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678557 CCDS:CCDS29933.1 GeneID:22326 MGI:1277163
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0031490 - chromatin DNA binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IMP] [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0001747 - eye development (sensu Mammalia) [Evidence IGI]; GO:0007406 - negative regulation of neuroblast proliferation [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0007399 - nervous system development [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : ventral anterior homeobox containing gene 1 protein_id : NP_033527.1

name	Kcnk18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402279 CCDS:CCDS29934.1 GeneID:332396 MGI:2685627
definition	GO_component : GO:0005886 - plasma membrane [Evidence IC] GO_function : GO:0015269 - calcium-activated potassium channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IDA] codon_start : 1 note : TWIK-related spinal cord K+ channel; TWIK-related individual K+ channel product : 2P K ion channel TRESK protein_id : NP_997144.1

name	Slc18a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369732 CCDS:CCDS29935.1 GeneID:214084 MGI:106677
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : vesicular monoamine transporter 2 product : solute carrier family 18 (vesicular monoamine), member 2 protein_id : NP_766111.1

name	Pdzd8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677508 CCDS:CCDS29936.1 GeneID:107368 MGI:2677270
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : mismatches in translation product : PDZ domain containing 8 protein_id : NP_001028394.1

name	LOC100043073 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270530 GeneID:100043073
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479496.1

name	Emx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119964700 CCDS:CCDS29937.1 GeneID:13797 MGI:95388
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IGI] [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0030900 - forebrain development [Evidence IGI] [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : empty spiracles homolog 2 protein_id : NP_034262.2

name	Rab11fip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677518 GeneID:74998 MGI:1922248
definition	codon_start : 1 exception : mismatches in translation product : Rab11-family interacting protein 2 protein_id : NP_001028344.1

name	LOC100043087 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270532 GeneID:100043087
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479515.1

name	D19Ertd737e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520379 CCDS:CCDS29939.1 GeneID:76539 MGI:1289174
definition	codon_start : 1 product : hypothetical protein LOC76539 protein_id : NP_083924.2

name	4933412A08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270584 GeneID:74445 MGI:1921695
definition	codon_start : 1 product : hypothetical protein LOC74445 protein_id : XP_001480811.1

name	Prlhr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42476094 CCDS:CCDS29940.1 GeneID:226278 MGI:2135956
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IDA]; GO:0004983 - neuropeptide Y receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007631 - feeding behavior [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0042445 - hormone metabolism [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : G protein-coupled receptor 10 protein_id : NP_963909.1

name	LOC668627 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668627
definition	number : 1 pseudo : _no_value

name	LOC100043093 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043093
definition	number : 3 pseudo : _no_value

name	LOC100043093 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043093
definition	number : 2 pseudo : _no_value

name	LOC100043093 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043093
definition	number : 1 pseudo : _no_value

name	LOC668626 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270582 GeneID:668626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 985 ESTs, 2 Proteins product : similar to eukaryotic translation elongation factor 1 gamma pseudo : _no_value transcript_id : XR_034819.1

name	Emx2os (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:84872157 GeneID:329078 MGI:3052329
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : empty spiracles homolog 2 (Drosophila) opposite strand transcript_id : NR_002863.1

name	LOC100043091 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270533 GeneID:100043091
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 5 Proteins product : similar to Csf3r protein pseudo : _no_value transcript_id : XR_034222.1

clone name	MSMg01-055G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477P18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-469F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154M02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-333L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223O05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-331J08.T7 (MSMg01no331_j08.b1)	MSMg01-331J08.TJ (MSMg01no331_j08.g1)
ACC	AG447844	AG447845
length	945	733
length of high quality (start - end)	---	486 (71 - 556)
definition	CHROMAT_FILE: MSMg01no331_j08.b1 PHD_FILE: MSMg01no331_j08.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:17:30 2005	CHROMAT_FILE: MSMg01no331_j08.g1 PHD_FILE: MSMg01no331_j08.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:17:30 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ACAAACAACAGAGGCCGCCGAAAAAAGNNNTAAATCGGGAGCTGAANGAA ANNNNNNATTTTGCTAGGAGAAGGAGGAGAGAGGAAAAGAAATACGCAAG ATGTGTATCCTCCTTATCCCCCAGTGGACGACGATAGACGGGAGAGTTTA ACATACCCATCTGCCTTATGTGTGGTATTCTCCGAAGCAAGGACGAAAGA AGCAAAGAGGGCCGCGCTTGATGGGGTCAAGGGGGGTTACCCACAATGCG GAAAAAAACTCACAGATATTATTCTTGCGTTCTGCCGATATAGGAGTGAT GAATGTTTCTCGCCCCGCGGGCCGCGGCAGGAATTTTTTTTTGGTGACAC GTGACGTCCGCCCGCGGTTTGGTTTTTAAGTCCCAGTATGTTCTAAATAC CCTGCCGCGCTAGATAACCGAGTGATTGTAAAAAAGTAAGATAATGCTTG CATCTGCTTCACCCCCCACCAAAAGTATTCTCAGGTGATAAATATTCATC GAGCTCACCCATTGTGCTACATATAGTGCAATATCAGCATATATAGTAAA CGTAGTTTCTACCACCACGCGCCATCACTCATTTTCCTACAACCAATTTA TTATCGTTATAGCGTCTGTAGACGTGTATATACATAGCTGTCCTTCTGCC GCCAGACTATCTGTTTTATACTCTCTTAATTTTACGCGGAAGCAAGACAT AATTATATTACAACATATCAAGAACCTAACTAACGATTTAAAATGAAANC ATATTATTACGTTAGTGTATGGCGGAGTTAGTAGGTTGGCAGCGTTAGAA CGCCGCCGCTGTATATATACTCGTCATCACCAATTACACAACACGAGAGA TATATGAAAGATGAAAGAAGCACANAGAAAGGCAGGACAACACATCTATA TCATATTCACTACACTACAATACGTACATCACACGCACCCCCAGN	TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXCAGGCCAGTGGGAGACCCTATCTCAAAAAC ATGAACAAAAGCAGACAGCCACCTGAGGAAAAGACACTTGAGACCTATAT ACACACACCTCACATGTGTGGAAACACAGATGCACATACAGAGAATTTTC ATCCACTCCCCCACATCTCAGCTTCTATAAGGAGAATGCTTTCCACCCTC AGATTTTCTTTCTTGTGTATCCCAAACATCTGTATGTATACATTTGGCTT CTCTTCTCTGAAACACGGGAGGAAGATAGATCCTTCTTGACCTTTCGTTC CTCAGTTTTTCGAAGTCAGTTTTCTCAGAGTAAGGAAACCCTTTGTGTAA TCACAGAGCAATAGCACCTTCAAGCTTCATGTGCATTGCTTTGTGCATAG GGATGTCCGTTCTCTCACACTGTGATCCCACACACACACAGGCACACATG AACACGCACAGGCACACGCACACTTGCTTATGAGCGTGCACGCCCACACA CACAGACACTCACACTTTTCTTAAACATAGTACATTTTCTTTATCCATTT GCTGGACATTTGGGTAATTTTTACCTGCTACCACGTGTGCTTAGCGATGT TGTAAACATGAGCATATGACTTTCGGCTCAAGCCTCTACTCCGGGTTTGT TTCAGGGCGCAAGGGGAATGCTTACCCATAAAT
quality values	Open. Hide. 8 8 8 13 7 9 9 9 8 9 13 10 8 8 11 12 13 12 10 10 10 9 10 8 8 7 3 0 0 0 3 6 6 6 7 7 7 6 8 8 8 6 7 7 6 3 0 3 7 7 3 0 0 0 0 0 0 3 9 10 11 6 6 6 7 6 6 9 9 9 9 8 9 9 8 8 10 8 8 8 8 8 11 11 10 11 10 10 9 8 8 8 8 8 8 8 8 8 9 9 9 9 8 10 8 9 10 9 6 7 6 8 8 8 8 8 9 10 11 13 15 12 12 9 9 8 6 8 8 8 6 6 8 6 8 8 8 8 8 8 8 8 8 12 8 8 8 8 8 10 10 10 10 8 8 8 8 10 10 14 11 10 10 10 15 8 10 6 7 6 6 10 10 10 8 8 8 8 8 6 6 8 8 8 10 12 8 8 8 8 8 6 8 12 12 12 9 15 8 8 6 6 8 6 8 10 10 10 10 8 8 8 8 8 8 10 8 8 8 8 8 8 8 9 8 8 8 8 8 8 11 11 11 11 15 15 12 12 10 10 10 10 10 10 11 11 11 9 8 8 8 8 8 10 14 8 8 6 6 8 8 6 7 7 8 8 6 6 8 6 6 6 8 9 8 8 8 8 8 8 8 8 10 10 10 10 8 8 9 8 8 8 9 8 8 6 6 6 8 8 8 8 8 8 8 8 6 7 6 8 8 9 9 11 11 11 17 11 11 11 11 10 10 10 10 11 11 11 11 11 9 9 9 9 11 11 11 15 14 11 10 11 10 10 10 10 10 13 10 10 9 10 8 10 10 8 8 8 10 8 10 11 9 9 8 10 8 8 10 10 12 11 9 10 9 9 8 8 6 6 8 6 7 8 10 9 9 9 12 9 9 11 18 16 21 11 16 12 11 11 8 8 7 7 10 8 8 6 6 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 6 6 6 8 6 8 8 8 6 6 6 6 10 8 8 8 6 6 8 6 9 9 8 8 8 6 6 8 12 10 11 8 8 8 12 9 8 8 8 8 8 8 8 10 10 11 10 8 8 8 8 8 8 8 10 8 10 11 8 8 10 11 11 8 11 9 9 9 8 6 6 7 10 12 10 10 10 8 8 8 10 8 8 6 6 10 10 8 8 9 9 9 9 9 9 9 9 11 11 12 12 11 11 11 11 10 10 8 8 6 7 6 6 8 8 8 8 6 7 7 8 8 8 8 6 6 8 8 8 8 10 8 10 10 10 10 12 12 11 8 8 6 7 12 8 6 6 8 8 11 11 12 8 8 6 7 7 7 8 8 10 10 11 11 11 11 10 11 11 11 10 10 10 10 10 11 11 11 11 11 11 11 10 10 9 9 9 9 8 8 8 8 8 8 8 8 10 11 10 10 10 10 10 10 10 10 10 10 10 11 6 8 8 8 6 6 8 8 8 8 9 10 8 8 8 8 8 6 6 10 10 10 10 13 7 7 8 8 8 8 8 8 8 10 10 10 10 10 10 10 10 8 8 6 6 8 8 10 8 8 6 6 6 6 8 9 15 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 13 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 10 9 9 8 8 8 8 8 3 0 3 6 6 8 8 10 9 9 9 9 10 10 10 10 9 8 6 6 6 8 8 8 8 8 8 6 6 7 6 8 8 13 10 8 8 10 8 8 8 8 8 8 8 8 8 8 8 10 10 9 9 8 8 8 9 9 8 8 8 8 9 9 11 10 10 12 10 13 8 8 8 8 8 8 8 8 8 8 8 6 6 10 10 10 10 8 8 8 9 8 8 6 6 6 12 8 8 10 8 8 8 8 8 7 6 8 8 8 8 9 9 9 9 10 8 6 6 6 6 8 6 8 8 8 3 0 3 10 8 8 8 8 6 6 8 10 8 8 8 8 8 8 6 7 8 8 8 8 6 6 8 6 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 6 6 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 6 10 6 7 8 10 13 13 8 7 3 0	Open. Hide. 9 9 9 9 9 15 10 11 9 9 9 11 20 28 34 34 34 44 44 39 37 37 44 44 34 26 16 8 6 6 6 6 6 6 6 8 8 11 15 16 18 30 27 37 37 37 39 39 39 39 39 50 50 43 33 19 16 19 15 16 12 14 15 15 17 22 20 22 33 33 37 47 37 39 37 37 43 43 43 57 43 43 33 33 33 42 42 42 57 57 57 48 42 42 36 42 44 54 54 54 48 50 50 50 47 47 48 50 50 57 54 54 54 57 54 57 44 47 47 47 47 43 47 48 48 48 50 50 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 54 54 57 57 50 54 52 57 57 54 52 57 52 52 52 57 59 68 68 68 57 57 57 57 54 52 52 57 57 57 57 57 54 54 57 59 59 54 52 57 57 50 51 50 50 57 57 59 57 57 57 57 68 57 57 57 57 57 59 59 68 68 59 59 59 59 57 57 48 57 57 59 59 57 57 57 57 68 68 68 68 68 50 50 47 47 47 50 57 59 57 57 57 57 57 57 57 57 57 57 59 68 68 59 68 68 68 59 59 59 54 48 59 59 57 57 57 57 57 57 59 59 59 59 68 59 59 54 47 47 59 59 59 59 48 48 48 59 59 59 59 59 59 59 59 59 59 59 50 50 59 59 59 59 59 59 59 59 44 41 39 41 43 39 30 26 16 16 16 29 29 39 32 32 35 39 36 43 43 57 57 57 59 59 59 59 57 57 57 57 57 57 59 59 68 68 68 59 59 59 59 59 59 59 68 68 59 59 48 48 43 59 59 59 48 48 48 57 48 44 59 47 48 40 40 33 36 42 43 42 42 42 42 48 57 57 54 54 54 57 59 59 59 54 54 54 54 44 44 42 37 37 43 43 57 50 48 48 50 44 43 18 18 12 19 19 36 32 37 37 37 37 44 44 57 46 40 37 44 42 54 54 59 59 59 59 34 34 20 19 19 34 34 59 48 47 47 43 37 37 30 28 27 24 20 20 28 32 44 37 42 37 39 39 32 32 23 23 18 23 21 34 34 37 42 48 48 57 48 48 47 43 39 39 33 30 25 25 28 34 37 37 28 28 23 28 25 34 27 20 13 13 13 19 19 25 28 28 28 28 13 13 13 28 28 39 43 36 36 36 40 40 43 43 43 43 37 42 32 28 28 23 20 11 11 12 23 20 35 28 41 24 30 24 32 32 34 34 22 23 23 28 28 14 12 11 11 11 13 16 16 16 18 12 14 14 28 28 15 15 12 10 10 17 17 24 19 15 13 18 16 23 11 12 10 10 10 10 19 23 33 28 21 24 20 20 23 10 13 8 8 8 9 11 11 12 13 17 15 15 15 11 9 10 10 11 12 19 20 28 22 10 10 9 15 10 12 11 15 17 12 18 14 10 10 9 12 15 29 21 21 9 8 8 8 10 11 8 8 8 13 13 20 29 28 33 28 19 23 9 9 9 9 9 10 19 19 16 21 18 27 24 23 21 16 22 21 23 23 23 23 18 14 16 12 11 8 10 10 9 9 15 27 30 32 22 19 10 10 9 9 9 19 11 7 6 6 6 10 7 15 14 14 14 21 17 15 18 17 18 19 18 16 13 12 10 9 9 9 12 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no331_j08.g1 MSMg01no331_j08.g1 CHROMAT_FILE:
MSMg01no331_j08.g1 PHD_FILE: MSMg01no331_j08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:30 2005
         (486 letters)



>mm_chr19_59592142_59593027
          Length = 886

 Score =  932 bits (482), Expect = 0.0
 Identities = 485/486 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggccagtgggagaccctatctcaaaaacatgaacaaaagcagacagccacctgaggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 caggccagtgggagaccctatctcaaaaacatgaacaaaagcagacagccacctgaggaa 643

                                                                       
Query: 61  aagacacttgagacctatatacacacacctcacatgtgtggaaacacagatgcacataca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aagacacttgagacctatatacacacacctcacatgtgtggaaacacagatgcacataca 583

                                                                       
Query: 121 gagaattttcatccactcccccacatctcagcttctataaggagaatgctttccaccctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gagaattttcatccactcccccacatctcagcttctataaggagaatgctttccaccctc 523

                                                                       
Query: 181 agattttctttcttgtgtatcccaaacatctgtatgtatacatttggcttctcttctctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 agattttctttcttgtgtatcccaaacatctgtatgtatacatttggcttctcttctctg 463

                                                                       
Query: 241 aaacacgggaggaagatagatccttcttgacctttcgttcctcagtttttcgaagtcagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aaacacgggaggaagatagatccttcttgacctttcgttcctcagtttttcgaagtcagt 403

                                                                       
Query: 301 tttctcagagtaaggaaaccctttgtgtaatcacagagcaatagcaccttcaagcttcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tttctcagagtaaggaaaccctttgtgtaatcacagagcaatagcaccttcaagcttcat 343

                                                                       
Query: 361 gtgcattgctttgtgcatagggatgtccgttctctcacactgtgatcccacacacacaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gtgcattgctttgtgcatagggatgtccgttctctcacactgtgatcccacacacacaca 283

                                                                       
Query: 421 ggcacacatgaacacgcacaggcacacgcacacttgcttatgagcgtgcacgcccacaca 480
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 282 ggcacacatgaacacgcacaggcacacgcacacttgcttatgagcatgcacgcccacaca 223

                 
Query: 481 cacaga 486
           ||||||
Sbjct: 222 cacaga 217


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space:   416976
Effective search space used:   416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information