XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGCGGAATTC
AAAGGGGTTCCCGAATGCAAAGCCACTTCACATCATACTTCATAGTGGCC
AAAACCTATAAAACGTCGACACAATGTAACAAGCAGATGTTTTGCTTTTT
CATGAAAGTATTTCTAACTCCCCACGTACATCCTACCATACAGTCCTATC
ACAGTGTGAGGGCTAGTTTCACAACGCATCAAACCCTTTCCTCAGCTGGT
TCCTTGAGACCATCACACAACACATTCATCCAGATCTCATTCGCCAGCCC
CCCATACCCTCACAGAGGCAGCCCACTTTCCTACTCACCCAAGTTTGTGT
CCTTGTTTTTTTGTTTTTTGTTTTTTGTTTTTAAACAACACTGGGTCAGA
TGCTCCTGGATGTGTGGCCATCCACTGGAGCATGGTAAACCCTCTTAAAG
ACAACCTGCTCGCCCTTCTCCATCAGCCACCAAGTACCAACAGCTCAGCT
AGGGTGAGGACTTCCTGCCTGCCTCCCTTCTTCACTGCATCAAGCTCTTA
AAGCTCCCAAAGTCTCCAGTTGTTTGTATTAAACACAGTGCCACTCAATA
ATAGAATTTCTTTTGGCAAAGACATTAAAACAAAACAAAACTTAAAGAGA
TTGTTCAAATATTTTACTTTTTGTGATAAAGAAACTCTTTTTCATTTCAC
ATAAGCTTCATTTTTTAAGTACTGTTCCAACTACAGAAGGAATG

CCACTGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXNGATGGNAAGGCAGGAGNTCATGAATGCAAATA
ANCCTGNNGCTAGGNGAATCTTGCTCTCCCCTCAANNNAANACNGAGACG
AACAGATACAGAAGATATGGAGAAGGGAAGACTGGGGCGGGGGGCGAATG
GAACAAAAACGAAAAATGTGGCCTNNNNNNNNNNNNNNNTNNCCCCNNAA
AATANNCCCCCNAAAAANNAAAATTTAAAACCCAAAAATAAAAAACTCCC
TTATTTCAAAAATTTCCCAATTAAAGTTTTAAAAGGGGCCCCCTCCCCCG
TTTTTTCCTTNCCCCCCCCCCAAAAAAAAAAAAAATTTTTTTTCAACACA
AAAACGGGGGTAAAAAAAAAAAAAAACTTCAAAAAAAAAGCCCCCCTTTT
NAAANANAAATNTCTTCCCCNCCCCCCCCCCCCCCCCCCCCCCCCTTTTT
TTTNNNAAAAAAANNNCTAAANCCACAAAACAACCCCCCCTCTTTTTNAT
AACCCCTCTCCNTATTNCCCCCCTCNNAAACCCACCCCCCCCAAACCTTT
TTTTTTCAAAATATCCTCACACNNNNCCCCCTCTCTCCNNNAATTTCCTT
TCCNNCCCTCCCCTCCCCCCNNCACCCCCCCACCCAAATAAATAATAAAA
ATAAAAT

Query= MSMg01no338_n22.b1 MSMg01no338_n22.b1 CHROMAT_FILE:
MSMg01no338_n22.b1 PHD_FILE: MSMg01no338_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:36 2005
         (572 letters)



>mm_chr19_40492055_40493026
          Length = 972

 Score = 1060 bits (548), Expect = 0.0
 Identities = 566/572 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcaaagccacttcacatcatacttcatagtggccaaaacctataaaacgtcgacacaatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcaaagccacttcacatcatacttcatagtggccaaaacctataaaacgtcgacacaatg 260

                                                                       
Query: 61  taacaagcagatgttttgctttttcatgaaagtatttctaactccccacgtacatcctac 120
           |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 taacaagcagatgtcttgctttttcatgaaagtatttctaactccccatgtacatcctac 320

                                                                       
Query: 121 catacagtcctatcacagtgtgagggctagtttcacaacgcatcaaaccctttcctcagc 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 catacagtcctatcacagtgtgagggctagtttcacaatgcatcaaaccctttcctcagc 380

                                                                       
Query: 181 tggttccttgagaccatcacacaacacattcatccagatctcattcgccagccccccata 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 tggttccttgagaccatcacacaacacattcatccagatctcattcaccagccccccata 440

                                                                       
Query: 241 ccctcacagaggcagcccactttcctactcacccaagtttgtgtccttgtttttttgttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctcacagaggcagcccactttcctactcacccaagtttgtgtccttgtttttttgttt 500

                                                                       
Query: 301 tttgttttttgtttttaaacaacactgggtcagatgctcctggatgtgtggccatccact 360
           |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttggttttcgtttttaaacaacactgggtcagatgctcctggatgtgtggccatccact 560

                                                                       
Query: 361 ggagcatggtaaaccctcttaaagacaacctgctcgcccttctccatcagccaccaagta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggagcatggtaaaccctcttaaagacaacctgctcgcccttctccatcagccaccaagta 620

                                                                       
Query: 421 ccaacagctcagctagggtgaggacttcctgcctgcctcccttcttcactgcatcaagct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccaacagctcagctagggtgaggacttcctgcctgcctcccttcttcactgcatcaagct 680

                                                                       
Query: 481 cttaaagctcccaaagtctccagttgtttgtattaaacacagtgccactcaataatagaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttaaagctcccaaagtctccagttgtttgtattaaacacagtgccactcaataatagaa 740

                                           
Query: 541 tttcttttggcaaagacattaaaacaaaacaa 572
           ||||||||||||||||||||||||||||||||
Sbjct: 741 tttcttttggcaaagacattaaaacaaaacaa 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)