Query= MSMg01no342_k06.b1 MSMg01no342_k06.b1 CHROMAT_FILE:
MSMg01no342_k06.b1 PHD_FILE: MSMg01no342_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:13 2005
(378 letters)
>mm_chr19_15378839_15379615
Length = 777
Score = 634 bits (328), Expect = 0.0
Identities = 349/358 (97%), Gaps = 5/358 (1%)
Strand = Plus / Minus
Query: 23 tgcttgaaacttttgtgtggtttggaatttcgagcataggcaggttaggaattaggccag 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tgcttgaaacttttgtgtggtttggaatttcgagcataggcaggttaggaattaggccag 518
Query: 83 ggagcttgaatttgtgatgatggtgttctggaacagtgtatgtttgggatctgagagatg 142
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 517 ggagcttgaatttgtgaggatgctgttctggaacagtgtatgtttgggatctgagagatg 458
Query: 143 tgaacctcctgcttttgtgtgtcttgtgtggaaagggagtgaatgaacagggaaatagag 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgaacctcctgcttttgtgtgtcttgtgtggaaagggagtgaatgaacagggaaatagag 398
Query: 203 atgaggctacgtatcgtgtccttgttggccttcctttgggctcctttgttcagaggtttt 262
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atgaggctacctagcgtgtccttgttggccttcctttgggctcctttgttcagaggtttt 338
Query: 263 tccatatctta--ttttttcagctaaggagagaggtgacagagatattttgtaccaaggg 320
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tccatatcttaaattt---cagctaaggagagaggtgacagagatattttgtaccaaggg 281
Query: 321 atgacagctagtgaccattggctccctaactgtaagagctctggtttattgtaatgac 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atgacagctagtgaccattggctccctaactgtaagagctctggtttattgtaatgac 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 777
Length adjustment: 9
Effective length of query: 369
Effective length of database: 768
Effective search space: 283392
Effective search space used: 283392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_k06.g1 MSMg01no342_k06.g1 CHROMAT_FILE:
MSMg01no342_k06.g1 PHD_FILE: MSMg01no342_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:13 2005
(432 letters)
>mm_chr19_15229227_15230058
Length = 832
Score = 781 bits (404), Expect = 0.0
Identities = 425/432 (98%)
Strand = Plus / Plus
Query: 1 ctcagtggcagaagcagcacttgtgggaagtggtggctgggacatgacacatcctcccaa 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcagtggcagaagcagcgcttgtgggaagtggtggctgggacatgacacatcctcccaa 260
Query: 61 gggaaaaggatgctgttttccccagcagtgatctccattagtccttggtccagctgattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggaaaaggatgctgttttccccagcagtgatctccattagtccttggtccagctgattt 320
Query: 121 ctcccagtcataacaaattaagatgcttcagaggcaagcagtgcccgcaagtgatctatc 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 ctcccagtcataacaaattaagatgctttagaggcaagcagtgcccgcaagtgatctatc 380
Query: 181 tccgagtacataccatcttccttctactaaacctccctaaatgtcatatttttcataaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccgagtacataccatcttccttctactaaacctccctaaatgtcatatttttcataaga 440
Query: 241 taattatatgcttttgttgagaaagattctgagttaggaaaccctgctgctcccctgctt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taattatacgcttttgttgagaaagattctgagttaggaaaccctgctgctcccctgctt 500
Query: 301 tctgcaggaactcattctggggatatttttcttttattccggaagataaaactttggaaa 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 tctgcaggaactcattctggggatatttttcttttactccggaagataaaactttggaaa 560
Query: 361 cttgatttcattggatgtttattgtcttgtctgagaaagtttaagcgatcagaagttctc 420
|||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 561 cttgatttcactggatgtttattgtcatgtctgagaaagtttaagcgaccagaagttctc 620
Query: 421 tcttaagttgtt 432
||||||||||||
Sbjct: 621 tcttaagttgtt 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
