Query= MSMg01no343_i11.b1 MSMg01no343_i11.b1 CHROMAT_FILE:
MSMg01no343_i11.b1 PHD_FILE: MSMg01no343_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:24 2005
(466 letters)
>mm_chr19_20986742_20987607
Length = 866
Score = 839 bits (434), Expect = 0.0
Identities = 455/462 (98%)
Strand = Plus / Minus
Query: 5 gaattccagtctactgctctctctctctctccctctatctctctctccttctttctccct 64
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 785 gaattccagtctactgttctctctctctctccctctctctctctctccttctttctccct 726
Query: 65 ctccctctctttctctctctctcccccttccccccctctccctctctctttctctctcta 124
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 725 ctccctctctttctctctctctccccctttcccccatctccctctctctttctctctcta 666
Query: 125 gtttgcacatgtccaaggtgattatataccaggatgtttgggtcgattagatggctcaac 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 665 gtttgcacatgtccaaggtgattatataccaggatgtttgggtcgatcagatggctcaac 606
Query: 185 taaaacaaaagggttcgtctgccctggatacccagtccctagacagtctatgtgaattgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 taaaacaaaagggttcgtctgccctggatacccagtccctagacagtctatgtgaattgc 546
Query: 245 tctattgttttcactttggctaagctcagctctttctaggcactcaggccactcttatta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tctattgttttcactttggctaagctcagctctttctaggcactcaggccactcttatta 486
Query: 305 aaaagactattatgcgagcaaatgttttgaattttttaaaccaaaaatgaaacagcatct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aaaagactattatgcgagcaaatgttttgaattttttaaaccaaaaatgaaacagcatct 426
Query: 365 aaagaagagctcatttaaggggcaccaggctgacattttaatacccagatacggtaagca 424
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 425 aaagaagagttcatttaaggggcaccaggctgacattttaatactcagatacggtaagca 366
Query: 425 gaccaccaatggtgcatcactaagacctcccacccctccctg 466
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaccaccaatggtgcatcactaagacctcccacccctccctg 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_i11.g1 MSMg01no343_i11.g1 CHROMAT_FILE:
MSMg01no343_i11.g1 PHD_FILE: MSMg01no343_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:24 2005
(329 letters)
>mm_chr19_20822598_20823332
Length = 735
Score = 590 bits (305), Expect = e-173
Identities = 325/335 (97%), Gaps = 6/335 (1%)
Strand = Plus / Plus
Query: 1 ctttctcaattgtctcaaagaatttgagaagaatgatttgttataggtttattatagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttctcaattgtctcaaagaatttgagaagaatgatttgttataggtttattatagtgt 260
Query: 61 ggatctggaatgttcctgtaatgactgtgcattgaaagattagtccccagcaactgttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatctggaatgttcctgtaatgactgtgcattgaaagattagtccccagcaactgttat 320
Query: 121 aggagaga------cttcaagtgggtcttagtgggaggtcccacttcatcagcagcagac 174
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggagagatagagacttcaagtgggtcttagtgggaggtcccacttcatcagcagcagac 380
Query: 175 actcaaatgttacatgaaaccctgagccccttcttttctcaattcacttcttcctacctt 234
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 actcaaacgttacatgaaaccctgagcccctccttttctcaattcacttcttcctacctt 440
Query: 235 ggagcaagcagctaccctgttgcacacccttgtcatgatggttggccatggataaaaagc 294
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 ggagcaagcagctatcctgttgcacacccttgtcatgatgcttggccatggataaaaagc 500
Query: 295 agtgaggtggactgactttgaccgtgaaacctgca 329
|||||||||||||||||||||||||||||||||||
Sbjct: 501 agtgaggtggactgactttgaccgtgaaacctgca 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 735
Length adjustment: 9
Effective length of query: 320
Effective length of database: 726
Effective search space: 232320
Effective search space used: 232320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
