XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAT
TATTACTATGACACCAGTTAATATGTCTTACCAGTGAAGTTGTTATTGTA
AGTCACAGAGTTTTAATTTGTGTAATCTTGATCATTACTTTTCTCCTCTG
GTATCTCATGTTGCACCTTCAAGCACTATGAGAGTTATCTTATATCAAAG
ATTTGAGAAATATTAAATTAATAATTTAGTGATGAACCTGAAAACCTTAA
AATATACCAAACAAACAATATCATAAAATATAGACTGGACAAAGCCTGCA
CATGTTAGCTGCATGCTTTTAATTCTATCACTAAAAAGTTATAGGTGAGT
AGATCTCTGTGAGTTTGAGGCCAGCCTGGTTAACATAATAATTTACAGAA
AAATCATGGCTTGTGTAGAAGTATCTTGTCTCAAAAAGCAAAACAACAGC
AAAACCAAAAATAATAAAGAAGAACTAATCAAAATGAAGGATGAGATAAA
GTAATGAAATAAAAACAGTCAAAATGCAGAAAAGAAAATGATTATTTTCT
CTTTTTTTCTTCTATTATATATATATATGTATGTATACATATATATATAT
ACATATATATATATATTTTTAATTAGGTATTTTCCACATTTACATTTCCA
ATGCTATCCCAAAAGTCCCCCATACCCTCCCCCCCCATTCCCCTACCCAC
CTACTCCCACTTTTTGGGCCTAGCATTC

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGAATGTAAAATAGTTATTACACTACTAA
AGGCAGTGTGAGTGCCCAAGGATGAATGGATAACAAATACAAATGATATT
GATTCTAATGTACACCACGTATTAGATAGAAGGCTCGGATATTAAACGTC
ATTGTGCTTTAATTATGGAACATATGGACATTCTAAACAAATATTGCAAA
CAAGCATTTCTAAGGATAATGGTTCTTTTTACATATAAGTCAGAAAGAAT
GTCTACACTTACAGGGTTCTACATGTAATGCAGCAGAAGTTAACACTGGA
TTAATGAGTATGGATACAAGAGAAATATCCAAGAAAATTTCTTGCTTTCA
GAAAATGAAATGGGGGTCCTAGCTCAAGGCTCCACAACAAAAAGTAGGAA
CTTTTTATCTATTGTCATCCAGGAAATAACAAGCAGACAGAAAAAAAAAA
AACTCAACTAAGTATTGCAGATCTAATGCATACTACTGCAGGAAGTGCTG
CTCTAGAATTGATCACAAATAGCATATTACACTATTTCCCCCCAAATTTT
CATGTTATAAAATATGTACTGGAGTTTATGGNCCTTTGCCATCCCAGACA
GTAAGAATGGGCTTGGAAAACTACCAGTTCCTTTCCTAAGGATTTTTTGT
GGTACCCGGAGGGACGAAACAAAATTGGTAAAAAAAAAAAAAAATCATGT
TTTTT

Query= MSMg01no348_h13.b1 MSMg01no348_h13.b1 CHROMAT_FILE:
MSMg01no348_h13.b1 PHD_FILE: MSMg01no348_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:46 2005
         (588 letters)



>mm_chr19_39452270_39453256
          Length = 987

 Score = 1079 bits (558), Expect = 0.0
 Identities = 579/588 (98%), Gaps = 6/588 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcattattactatgacaccagttaatatgtcttaccagtgaagttgttattgtaa 63
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattaatactatgacaccagttaatatgtcttaccagtgaagttgttattgtaa 263

                                                                       
Query: 64  gtcacagagttttaatttgtgtaatcttgatcattacttttctcctctggtatctcatgt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtcacagagttttaatttgtgtaatcttgatcattacttttctcctctggtatctcatgt 323

                                                                       
Query: 124 tgcaccttcaagcactatgagagttatcttatatcaaagatttgagaaatattaaattaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgcaccttcaagcactatgagagttatcttatatcaaagatttgagaaatattaaattaa 383

                                                                       
Query: 184 taatttagtgatgaacctgaaaaccttaaaatataccaaacaaacaatatcataaaatat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taatttagtgatgaacctgaaaaccttaaaatataccaaacaaacaatatcataaaatat 443

                                                                       
Query: 244 agactggacaaagcctgcacatgttagctgcatgcttttaattctatcactaaaaagtta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agactggacaaagcctgcacatgttagctgcatgcttttaattctatcactaaaaagtta 503

                                                                       
Query: 304 taggtgagtagatctctgtgagtttgaggccagcctggttaacataataatttacagaaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taggtgagtagatctctgtgagtttgaggccagcctggttaacataataatttacagaaa 563

                                                                       
Query: 364 aatcatggcttgtgtagaagtatcttgtctcaaaaagcaaaacaacagcaaaaccaaaaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aatcatggcttgtgtagaagtatcttgtctcaaaaagcaaaacaacagcaaaaccaaaaa 623

                                                                       
Query: 424 taataaagaagaactaatcaaaatgaaggatgagataaagtaatgaaataaaaacagtca 483
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taataaagaataactaatcaaaatgaaggatgagataaagtaatgaaataaaaacagtca 683

                                                                       
Query: 484 aaatgcagaaaagaaaatgattattttctctttttttcttctattatatatatatatgta 543
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 aaatgcagaaaagaaaatgattattttctctttttt-cttctattatatatatatatgta 742

                                                           
Query: 544 tgtatacatatatatatatacatatatatatatattttt---aattag 588
           ||||||||||||||||||  ||||||||||||| |||||   ||||||
Sbjct: 743 tgtatacatatatatata--catatatatatattttttttttaattag 788


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 987
Length adjustment: 10
Effective length of query: 578
Effective length of database: 977
Effective search space:   564706
Effective search space used:   564706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)