Query= MSMg01no350_g10.b1 MSMg01no350_g10.b1 CHROMAT_FILE:
MSMg01no350_g10.b1 PHD_FILE: MSMg01no350_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:19 2005
(343 letters)
>mm_chr19_44503036_44503778
Length = 743
Score = 603 bits (312), Expect = e-177
Identities = 321/324 (99%)
Strand = Plus / Minus
Query: 20 atactaatctgactaaattgattcagtgtcctgatagggtattttgaaagtaagatattc 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atactaatctgactaaattgattcagtgtcctgatagggtattttgaaagtaagatattc 684
Query: 80 cagcagggtatggtagtgcatgaccttaatcccagtgcccagcaggtagaggcaggagga 139
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 683 cagcagggtatggtagtgcatgaccttaatcccattgcccagcaggtagaggcaggagga 624
Query: 140 tctctctaagtttgaggctagcatagtctatataataagttctaggacagccaggactat 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tctctctaagtttgaggctagcatagtctatataataagttctaggacagccaggactat 564
Query: 200 gtagagagagacctggtctctgtcaccatagtgatcaggtatactatccattgtgatggt 259
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 563 gtagagagagacccggtctctgtcaccatagtgatcaggtatactatccactgtgatggt 504
Query: 260 aagccatcatggtcactgtggtggtcagtcattgtcattgaggttatcatttgtagtgtt 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aagccatcatggtcactgtggtggtcagtcattgtcattgaggttatcatttgtagtgtt 444
Query: 320 cattgtgatggtcagtcatggtgg 343
||||||||||||||||||||||||
Sbjct: 443 cattgtgatggtcagtcatggtgg 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_g10.g1 MSMg01no350_g10.g1 CHROMAT_FILE:
MSMg01no350_g10.g1 PHD_FILE: MSMg01no350_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:19 2005
(238 letters)
>mm_chr19_44323620_44324255
Length = 636
Score = 414 bits (214), Expect = e-120
Identities = 227/232 (97%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 6 aattgctgaactagatactgttttccagaatgaagtcttaagtgtccccacgtccacagg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattgctgaactagatactgttttccagaatgaagtcttaagtgtccccacgtccacagg 265
Query: 66 agaggcccagtggccagtggaggagaagacacgaggagagaagggggggcagggagggaa 125
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 266 agaggcccagtggccagtggaggagaagacacgaggaggg--gggggggcagggagggaa 323
Query: 126 gagatggcatgggggacagcagacagagctgagccagggacaatggttggataaagtaac 185
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagatggcataggggacagcagacagagctgagccagggacaatggttggataaagtaac 383
Query: 186 atcgaatagtctttgaccagtgactgaggaaagcagaattgatgcgcgcgca 237
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 384 atcgaatagtctttgaccagtgactgaggaaagcagaattgatgtgcgcgca 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 636
Length adjustment: 9
Effective length of query: 229
Effective length of database: 627
Effective search space: 143583
Effective search space used: 143583
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
