Query= MSMg01no351_i22.b1 MSMg01no351_i22.b1 CHROMAT_FILE:
MSMg01no351_i22.b1 PHD_FILE: MSMg01no351_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:50 2005
(368 letters)
>mm_chr19_24206908_24207675
Length = 768
Score = 667 bits (345), Expect = 0.0
Identities = 360/365 (98%), Gaps = 2/365 (0%)
Strand = Plus / Minus
Query: 5 gaattcctattgctgtccatgccgattcatgctttctggagtgaccctggggtgtgggta 64
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 568 gaattcctattgctgtccatgccgattcatgctttctggagtgaccccggggtgtgggta 509
Query: 65 gacagaccttgtacacaaacatggtggttcttaataaacatccagaagccgagtgtgtgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gacagaccttgtacacaaacatggtggttcttaataaacatccagaagccgagtgtgtgg 449
Query: 125 cttgtggtttcttacctctgaagagctctcagaccaagttggcatgacttgtgagccatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cttgtggtttcttacctctgaagagctctcagaccaagttggcatgacttgtgagccatt 389
Query: 185 gcaccctgagcccttcagtacacttcat-gggctcatttgctgcttctgtttggctctcc 243
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 388 gcaccctgagcccttcagtacacttc-tcgggctcatttgctgcttctgtttggctctcc 330
Query: 244 ggggttcaagatgactgatgcttgttttgtgtttacagagaaaatgacagggtggtcatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggggttcaagatgactgatgcttgttttgtgtttacagagaaaatgacagggtggtcatg 270
Query: 304 gtcaatggcacccccatggaagatgtgctccattcgtttgccgatcagcagcttaagaaa 363
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 269 gtcaatggcacccccatggaagatgtgctccattcgtttgccgttcagcagcttaggaaa 210
Query: 364 agtgg 368
|||||
Sbjct: 209 agtgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_i22.g1 MSMg01no351_i22.g1 CHROMAT_FILE:
MSMg01no351_i22.g1 PHD_FILE: MSMg01no351_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:50 2005
(427 letters)
>mm_chr19_24063336_24064159
Length = 824
Score = 721 bits (373), Expect = 0.0
Identities = 411/425 (96%), Gaps = 3/425 (0%)
Strand = Plus / Plus
Query: 1 tgtgaacagtaggcctggaccacgtagaaagatctcccagggctcactgtcaacacaggc 60
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tgtgaacagtaggcctgggccacgtagaaagatcccccagggctcactgtcaacacaggc 260
Query: 61 gtggatttgtatcaaagtgataattgatgaataaccttgaccattcttaatgagatgctc 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gtggatttgtatcaaagtgataattgatgaatagccttgaccattcttaatgagatgctc 320
Query: 121 tgccaacttccgtccacctttcctagtttttcttaaggcaagctgagaaaaaaaaaaaac 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccaacttccggccacctttcctagtttttcttaaggcaagctgagaaaaaaaaaa--- 377
Query: 181 aaaatgtaatacctggtttggggactcaaaaccccagcggaggcagaggcagcctttcta 240
|||| |||| |||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 378 aaaacgtaacacctggtttggggactcaaaaccccagcgggggcagaggcggcctttcta 437
Query: 241 acttgttctgcagtctgagctgacttggctttgcttccagttttcctaccagggaaggtt 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 acttgttctgccttctgagctgacttggctttgcttccagttttcctaccagggaaggtt 497
Query: 301 acagctcactaactgttaattaggcagctctcaattcactaagtgcaaactctccaaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 acagctcactaactgttaattaggcagctctcaattcactaagtgcaaactctccaaagg 557
Query: 361 aggactacactggcacactcttttaactggtggggaggtatttttcttattgaattaatt 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aggactacactggcactctcttttaactggtggggaggtatttttcttattgaattaatt 617
Query: 421 ttttt 425
|||||
Sbjct: 618 ttttt 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 824
Length adjustment: 9
Effective length of query: 418
Effective length of database: 815
Effective search space: 340670
Effective search space used: 340670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
