ACCCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAACCTTACGCAGCACAGCTCCAGCGCATGCTGGCAGTGAG
AGGTAATTTAAATCTCATTCTGAAGGACTTGGGTGATAAGGGCTACTTCA
GAAATACAAAGAGGCTGACCCAAGAAAATCTAAAGATTTTCTGAGACCCT
TGATATAGCTGATCCATTGTCCTGCTAGTAATTGTTTCATCACTCACCCA
AACATCTGCTAACAAGGTGGCTAACTATGGGGCTTCCATTTGGGACACAC
ACATTTATCATCTGATTAGGAAGTGATGATCTATTTTTAGATAAAACATA
TATCCCCTAACAGGGATGGACAGTTATAAATAACTTGGAAAACGCTAGCC
GACTCCCAAAACATCATGATTTAGGTTGAAAGAAAAAGCCTTTCTGATCA
CTGTCCTTTTGTCTCTACCAGCACATTCTTCATGTTTAGTTGCTGTCACC
CCTGATAAGTGATCACGTTGGCTGTATCCTATCTCCTCATAAGCTAAAGT
AGTGGGAAGAACCATTTCTATCAGACAGATAAAATCTATACCCAAGGGAG
AAGAAGCGGCGCTCTAGGACTTTCACCCTATAATTGGTTAGTTAGGCCCA
CTCCCATTTACATCTGAAAGATATTGGGAAAACCTCAGAAACCAGCTCCA
ATTAGGCCCCTATGGGGTGGAGCGAAAACCCCCTGCTTGA

NNNNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAGAGATCCGACTGCCTCTG
CCTCTGGAGTGCTGTCTGGCTTGACTTCACATTTCTGAACCTTAGTTTTT
CCTACATCTCGACATGGCTGTGGGCTCATACTTAAGTCTGAGTATAAACA
AAGTAACGGGAGTAAAAACAGTAACAGGAGCCTCTTTCTACTCCCACACT
CAGGCTGGACTCTGCCTTGGTATCTGCTGTTCTCTAGTAGCAGCCTACTG
TCTGTCCTCTTGCCAGCCATCCTCCTCTCCTTTCTCATCGCCGGGCTCAG
CCCTTAATTTCCTGTCCCATGTTGGACATCAAAGTTGAGCAAACACTACT
AACCTTGAGCTTGGGCCAAACACTCCCAGTGCATGAACTTCACCCTATTC
CTTGACTGAGAGCCTGGAAGGGACTTTTTCTGAGAAAAACCTTGATGTGG
CTACATGATGCAGCAGTTAGCTCCAGGTGGGGGAGGGTACAACTACTCAC
CCTGGCCTAGACTTCCTGAAATTTTGGAGATTTTTTTATTCTGAAGCTTA
ACCCTTATGATTCCCTTGGAAACACAATCCCTGTCCTTAACTTGAATTTT
GACCTGGTTTTTTGGAGCCACACTCCTTATTCCAGTAGCATTTCCCTCCC
CCCTATTTTTTTTTTTCCCCTTCCTTTTCTTCCTTATCCCTTCTTTTTTT

Query= MSMg01no352_b14.b1 MSMg01no352_b14.b1 CHROMAT_FILE:
MSMg01no352_b14.b1 PHD_FILE: MSMg01no352_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:31 2005
         (435 letters)



>mm_chr19_60776542_60777376
          Length = 835

 Score =  810 bits (419), Expect = 0.0
 Identities = 428/431 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaccttacgcagcacagctccagcgcatgctggcagtgagaggtaatttaaatc 64
           ||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaccagatgcagcacagctccagcgcatgctggcagtgagaggtaatttaaatc 264

                                                                       
Query: 65  tcattctgaaggacttgggtgataagggctacttcagaaatacaaagaggctgacccaag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcattctgaaggacttgggtgataagggctacttcagaaatacaaagaggctgacccaag 324

                                                                       
Query: 125 aaaatctaaagattttctgagacccttgatatagctgatccattgtcctgctagtaattg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaatctaaagattttctgagacccttgatatagctgatccattgtcctgctagtaattg 384

                                                                       
Query: 185 tttcatcactcacccaaacatctgctaacaaggtggctaactatggggcttccatttggg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttcatcactcacccaaacatctgctaacaaggtggctaactatggggcttccatttggg 444

                                                                       
Query: 245 acacacacatttatcatctgattaggaagtgatgatctatttttagataaaacatatatc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acacacacatttatcatctgattaggaagtgatgatctatttttagataaaacatatatc 504

                                                                       
Query: 305 ccctaacagggatggacagttataaataacttggaaaacgctagccgactcccaaaacat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccctaacagggatggacagttataaataacttggaaaacgctagccgactcccaaaacat 564

                                                                       
Query: 365 catgatttaggttgaaagaaaaagcctttctgatcactgtccttttgtctctaccagcac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catgatttaggttgaaagaaaaagcctttctgatcactgtccttttgtctctaccagcac 624

                      
Query: 425 attcttcatgt 435
           |||||||||||
Sbjct: 625 attcttcatgt 635


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space:   351876
Effective search space used:   351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no352_b14.g1 MSMg01no352_b14.g1 CHROMAT_FILE:
MSMg01no352_b14.g1 PHD_FILE: MSMg01no352_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:31 2005
         (433 letters)



>mm_chr19_60949178_60950010
          Length = 833

 Score =  837 bits (433), Expect = 0.0
 Identities = 433/433 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   acagagatccgactgcctctgcctctggagtgctgtctggcttgacttcacatttctgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 acagagatccgactgcctctgcctctggagtgctgtctggcttgacttcacatttctgaa 609

                                                                       
Query: 61  ccttagtttttcctacatctcgacatggctgtgggctcatacttaagtctgagtataaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ccttagtttttcctacatctcgacatggctgtgggctcatacttaagtctgagtataaac 549

                                                                       
Query: 121 aaagtaacgggagtaaaaacagtaacaggagcctctttctactcccacactcaggctgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aaagtaacgggagtaaaaacagtaacaggagcctctttctactcccacactcaggctgga 489

                                                                       
Query: 181 ctctgccttggtatctgctgttctctagtagcagcctactgtctgtcctcttgccagcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ctctgccttggtatctgctgttctctagtagcagcctactgtctgtcctcttgccagcca 429

                                                                       
Query: 241 tcctcctctcctttctcatcgccgggctcagcccttaatttcctgtcccatgttggacat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tcctcctctcctttctcatcgccgggctcagcccttaatttcctgtcccatgttggacat 369

                                                                       
Query: 301 caaagttgagcaaacactactaaccttgagcttgggccaaacactcccagtgcatgaact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 caaagttgagcaaacactactaaccttgagcttgggccaaacactcccagtgcatgaact 309

                                                                       
Query: 361 tcaccctattccttgactgagagcctggaagggactttttctgagaaaaaccttgatgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tcaccctattccttgactgagagcctggaagggactttttctgagaaaaaccttgatgtg 249

                        
Query: 421 gctacatgatgca 433
           |||||||||||||
Sbjct: 248 gctacatgatgca 236


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space:   349376
Effective search space used:   349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)