NNNTTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTCCCCCACTCCTCTACCTGAGGAATGTATTGTCGCCTCAG
TTAGATTACAGGATCAATTTCCTTTCTCCTGATAAAACCTGCTCAGCTAG
CACCTGAGATCCTGAAATGCTTCCCCTTGCTAGTAAGGTCTTTTGTTGCC
TCCAGCCTTTGCTCGTCCTTGAGGTTCCGACCCTCAGTCCCCCAAAACTT
TATAAGCCTTGAATCATAAGTTGAAATGCCTCCTGATAGCTGGCCACCCC
CAACCCAACTACCCTGGTGGACCTTACCAGTAAACGATCCACGAGAGTGG
GGAGGTGCGCACTCGGCCATTCAGTGAGCATGAGCCGGACACACATACCC
CACCCCACAATCTTGGATCCACAGATGTGTGGGTCAGTGGCAGCTGTAAC
AGTCCACTGGGGACACATGTGCTGGCTCGTTCGGACCATGCTATCTCTGC
CTTTCACTTCAACTTTTCGGGGACTGTACACTGGGNCATTACAATCTTGC
TTTTGCTTANNGATTTGCAATCAACGATGGGGGCATCTTTTTGCTGACTT
ATCACATTCCAGAAAGATTCCCCCGTAAATAATGGGTCCTTTAAGGGGGA
AAACATTTCCTAAAATTTGGTGGGGTTCCCCCCACCCGGATTTAAATCCC
AATCTCCCTCCCAAAAAAAAAGAAAAACATTGGAACAAATTAATTTTGGG
GGACAGGGTTCCTTCCCATGCGAAAAAAGTTTC

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGGAAAAGAAGCGAAGGAGCCTC
TTTAGTCCATAAAGTGAAATGGGCACTGAGAGCCCGGAGATGAGCAAGCT
GGGGATCAGAAAGGGTAAGGAAGTGGCTCAAGGCCACACAGCTAATACTT
GGACCACATGACATAATGTGTGCAGATAGAAGAACTGTCGTTCCCACAGC
CCAGCGCGGAGGGCGAGCTGTTCCAACATGTCCATCTTTTAACATCTCAC
CACCTGGTTTAGCATCTGCCCCATGGAGATGCTCTGACAGAGGAAGCAGG
TTAGCATCTATCAGAGCCCCAGGAAACCTGTGCCTTTTTGCCTCTGGAAT
GTTTCTGGCACCATATCTGCCTCCTAAAGCTGATGGGGACCCTCTAGCAG
GCTCACAGCACCTTGATGTCCATGCCACAGAGCAAGGCAGGCCTCTGGCT
CTCTGCTGTGCTCCCTACAGTTGCACACACTGCTTTGGAAGGCCATTCCC
CTGCCCCTCTCGCTGGACCCGAAATAAGCTTGCGAAAAAGATCATTTCCC
CCCACCGGGGGCCGCCCTGCGGGAAAACCCTTTGCACCTCAAACTCTTTT
GGCTTTTGGGCCCCCTTTTTTTCCTCCAACAAAAAAACCATTTTTTCTGT
GCTCTCCCAAAAAAAAATTGGTTCTAAAACCCAATTCCATTCTTAAACCT
TTGTGAAAGTTTGTCCTCCTCTCCCCTTCCCATGTGTTCCCTTCCTCCCC
TTCTTCCTTCCTTTAAAATCG

Query= MSMg01no352_k23.b1 MSMg01no352_k23.b1 CHROMAT_FILE:
MSMg01no352_k23.b1 PHD_FILE: MSMg01no352_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:19 2005
         (471 letters)



>mm_chr19_57248001_57248871
          Length = 871

 Score =  804 bits (416), Expect = 0.0
 Identities = 455/468 (97%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttcccccactcctctacctgaggaatgtattgtcgcctcagttagattacagg 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttcccccacgcctctacctgaggaatgtattgtcgcctcagttagattacagg 263

                                                                       
Query: 64  atcaatttcctttctcctgataaaacctgctcagctagcacctgagatcctgaaatgctt 123
            ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttcaatttcctttctcctgacaaaacctgctcagctagcacctgagatcctgaaatgctt 323

                                                                       
Query: 124 ccccttgctagtaaggtcttttgttgcctccagcctttgctcgtccttgaggttccgacc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccccttgctagtaaggtcttttgttgcctccagcctttgctcgtccttgaggttccgacc 383

                                                                       
Query: 184 ctcagtcccccaaaactttataagccttgaatcataagttgaaatgcctcctgatagctg 243
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 384 ctcagtcccccaaaactttataagccttgaatcataagttgaaatgcttcctgatagctg 443

                                                                       
Query: 244 gccacccccaacccaactaccctggtggaccttaccagtaaacgatccacgagagtgggg 303
           |||||| ||||||||  ||||||  ||||||||| |||||||||||||||||||||||||
Sbjct: 444 gccacctccaacccaggtaccctcatggaccttatcagtaaacgatccacgagagtgggg 503

                                                                       
Query: 304 aggtgcgcactcggccattcagtgagcatgagccggacacacataccccaccccacaatc 363
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aggtgtgcactcggccattcagtgagcatgagccggacacacataccccaccccacaatc 563

                                                                       
Query: 364 ttggatccacagatgtgtgggtcagtggcagctgtaacagtccactggggacacatgtgc 423
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttggatccacagctgtgtgggtcagtggcagctgtaacagtccactggggacacatgtgc 623

                                                           
Query: 424 tggctcgttcggaccatgctatctctgcctttcacttcaacttttcgg 471
           ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 624 tggctcgttcggaccatgctatctctgccttccacttcaacttttcgg 671


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space:   396921
Effective search space used:   396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no352_k23.g1 MSMg01no352_k23.g1 CHROMAT_FILE:
MSMg01no352_k23.g1 PHD_FILE: MSMg01no352_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:19 2005
         (393 letters)



>mm_chr19_57269302_57270094
          Length = 793

 Score =  721 bits (373), Expect = 0.0
 Identities = 388/393 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggaaaagaagcgaaggagcctctttagtccataaagtgaaatgggcactgagagcccg 60
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 714 caggaaaagaagcgaaggagcctctttagtccgtaaagtgaaatgggcactgagagccca 655

                                                                       
Query: 61  gagatgagcaagctggggatcagaaagggtaaggaagtggctcaaggccacacagctaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gagatgagcaagctggggatcagaaagggtaaggaagtggctcaaggccacacagctaat 595

                                                                       
Query: 121 acttggaccacatgacataatgtgtgcagatagaagaactgtcgttcccacagcccagcg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 594 acttggaccacatgacataatgtgtgcagatagaagaactgtcgttcccacagcccagcc 535

                                                                       
Query: 181 cggagggcgagctgttccaacatgtccatcttttaacatctcaccacctggtttagcatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cggagggcgagctgttccaacatgtccatcttttaacatctcaccacctggtttagcatc 475

                                                                       
Query: 241 tgccccatggagatgctctgacagaggaagcaggttagcatctatcagagccccaggaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgccccatggagatgctctgacagaggaagcaggttagcatctatcagagccccaggaaa 415

                                                                       
Query: 301 cctgtgcctttttgcctctggaatgtttctggcaccatatctgcctcctaaagctgatgg 360
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 414 cctgtgcctttttgcctctggaatgtttctggtaccatatctgcctcctaaagctgatgg 355

                                            
Query: 361 ggaccctctagcaggctcacagcaccttgatgt 393
           |||||||||||||||||||||||| ||||||||
Sbjct: 354 ggaccctctagcaggctcacagcatcttgatgt 322


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space:   301056
Effective search space used:   301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)