MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-360J11
Chromosome	19 (Build37)
Map Location	53,255,232 - 53,255,724
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ins1, LOC100043450, Xpnpep1, LOC668545, LOC674277
Downstream gene	Add3, 1700001K23Rik, Mxi1, Smndc1, Dusp5, LOC100043462, Smc3, Rbm20, LOC100042979, Pdcd4, 2310002J21Rik, Shoc2, Adra2a
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ins1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16333 MGI:96572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043450 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043450
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Xpnpep1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170750 MGI:2180003
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668545 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC674277 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Add3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27360 MGI:1351615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700001K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69319 MGI:1916569
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Mxi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17859 MGI:97245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Smndc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76479 MGI:1923729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dusp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240672 MGI:2685183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 84 ESTs, 5 Proteins

name	LOC100043462 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 314 ESTs, 2 Proteins

name	Smc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13006 MGI:1339795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73713 MGI:1920963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 2 Proteins

name	LOC100042979 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Pdcd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18569 MGI:107490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310002J21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66360 MGI:1913610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 46 ESTs

name	Shoc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56392 MGI:1927197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adra2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11551 MGI:87934
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ins1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606344 GeneID:16333 MGI:96572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin I transcript_id : NM_008386.3

name	LOC100043450 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270566 GeneID:100043450
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100043450 transcript_id : XM_001480540.1

name	Xpnpep1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476273 GeneID:170750 MGI:2180003
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : X-prolyl aminopeptidase (aminopeptidase P) 1, soluble transcript_id : NM_133216.2

name	LOC668545 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270515 GeneID:668545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC668545 transcript_id : XM_001487806.1

name	Add3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542110 GeneID:27360 MGI:1351615
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adducin 3 (gamma) transcript_id : NM_013758.2

name	1700001K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406040 GeneID:69319 MGI:1916569
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 1700001K23 gene transcript_id : XM_001002211.1

name	Mxi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520595 GeneID:17859 MGI:97245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Max interacting protein 1 transcript_id : NM_001008542.2

name	Mxi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520598 GeneID:17859 MGI:97245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Max interacting protein 1 transcript_id : NM_010847.3

name	Mxi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520597 GeneID:17859 MGI:97245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Max interacting protein 1 transcript_id : NM_001008543.2

name	Smndc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130023 GeneID:76479 MGI:1923729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : survival motor neuron domain containing 1 transcript_id : NM_172429.2

name	Dusp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270568 GeneID:240672 MGI:2685183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 84 ESTs, 5 Proteins product : dual specificity phosphatase 5 transcript_id : XM_140740.8

name	LOC100043462 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270570 GeneID:100043462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 314 ESTs, 2 Proteins product : similar to nuclear transport factor 2 transcript_id : XM_001480585.1

name	Smc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:36031034 GeneID:13006 MGI:1339795
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : structural maintenace of chromosomes 3 transcript_id : NM_007790.2

name	Rbm20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270572 GeneID:73713 MGI:1920963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 2 Proteins product : RNA binding motif protein 20 transcript_id : XM_001002314.2

name	Pdcd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356921 GeneID:18569 MGI:107490
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : programmed cell death 4 transcript_id : NM_011050.3

name	2310002J21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270574 GeneID:66360 MGI:1913610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 46 ESTs product : RIKEN cDNA 2310002J21 gene transcript_id : XM_001480596.1

name	Shoc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372584 GeneID:56392 MGI:1927197
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : soc-2 (suppressor of clear) homolog (C. elegans) transcript_id : NM_019658.5

name	Adra2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78711825 GeneID:11551 MGI:87934
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adrenergic receptor, alpha 2a transcript_id : NM_007417.2

name	Ins1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606345 CCDS:CCDS29898.1 GeneID:16333 MGI:96572
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006006 - glucose metabolism [Evidence IEA]; GO:0015758 - glucose transport [Evidence TAS]; GO:0007582 - physiological process [Evidence IEA] codon_start : 1 product : insulin I protein_id : NP_032412.3

name	LOC100043450 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270567 GeneID:100043450
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480590.1

name	Xpnpep1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42476274 CCDS:CCDS29899.1 GeneID:170750 MGI:2180003
definition	GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008451 - X-Pro aminopeptidase activity [Evidence IEA] codon_start : 1 note : cytosolic aminopeptidase P product : X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein_id : NP_573479.2

name	LOC668545 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270516 GeneID:668545
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001487856.1

name	Add3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542111 CCDS:CCDS29900.1 GeneID:27360 MGI:1351615
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IDA]; GO:0016020 - membrane [Evidence IDA] GO_function : GO:0005516 - calmodulin binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IDA] codon_start : 1 note : gamma adducin; cytoskeletal protein product : adducin 3 (gamma) protein_id : NP_038786.2

name	1700001K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406041 GeneID:69319 MGI:1916569
definition	codon_start : 1 product : hypothetical protein LOC69319 protein_id : XP_001002211.1

name	Mxi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114520596 GeneID:17859 MGI:97245
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : Max interactor 1 isoform b protein_id : NP_001008542.2

name	Mxi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754766 CCDS:CCDS29901.1 GeneID:17859 MGI:97245
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : Max interactor 1 isoform a protein_id : NP_034977.1

name	Mxi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:57242751 GeneID:17859 MGI:97245
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 3 product : Max interactor 1 isoform c protein_id : NP_001008543.1

name	Smndc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369569 CCDS:CCDS29902.1 GeneID:76479 MGI:1923729
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0000245 - spliceosome assembly [Evidence IEA] codon_start : 1 product : survival motor neuron domain containing 1 protein_id : NP_766017.1

name	Dusp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270569 GeneID:240672 MGI:2685183
definition	codon_start : 1 product : dual specificity phosphatase 5 protein_id : XP_140740.4

name	LOC100043462 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270571 GeneID:100043462
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480635.1

name	Smc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:36031035 GeneID:13006 MGI:1339795
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0008278 - cohesin complex [Evidence ISS]; GO:0005737 - cytoplasm [Evidence ISS]; GO:0000800 - lateral element [Evidence IDA]; GO:0016363 - nuclear matrix [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA]; GO:0000922 - spindle pole [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0045502 - dynein binding [Evidence ISS]; GO:0003777 - microtubule motor activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0051276 - chromosome organization and biogenesis [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0007126 - meiosis [Evidence IPI] [Evidence ISS]; GO:0007067 - mitosis [Evidence IEA]; GO:0007052 - mitotic spindle organization and biogenesis [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0007062 - sister chromatid cohesion [Evidence ISS] codon_start : 1 product : chondroitin sulfate proteoglycan 6 protein_id : NP_031816.2

name	Rbm20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270573 GeneID:73713 MGI:1920963
definition	codon_start : 1 note : overriding stop codons product : similar to hCG2036763 protein_id : XP_001002314.2 transl_except : (pos:53895356..53895358,aa:OTHER)

name	Pdcd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625656 CCDS:CCDS29903.1 GeneID:18569 MGI:107490
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005829 - cytosol [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0007569 - cell aging [Evidence ISS]; GO:0043508 - negative regulation of JNK activity [Evidence ISS]; GO:0016481 - negative regulation of transcription [Evidence ISS] codon_start : 1 product : programmed cell death 4 protein_id : NP_035180.2

name	2310002J21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270575 GeneID:66360 MGI:1913610
definition	codon_start : 1 product : hypothetical protein LOC66360 protein_id : XP_001480646.1

name	Shoc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543701 CCDS:CCDS29904.1 GeneID:56392 MGI:1927197
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : Ras-binding protein SUR-8; suppressor of clear, C. elegans, homolog of product : soc-2 (suppressor of clear) homolog protein_id : NP_062632.2

name	Adra2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78711826 CCDS:CCDS29905.1 GeneID:11551 MGI:87934
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004935 - adrenoceptor activity [Evidence IMP]; GO:0004938 - alpha2-adrenergic receptor activity [Evidence TAS]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0042596 - fear response [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : subtype alpha2-C10; alpha2A-adrenergic receptor product : adrenergic receptor, alpha 2a protein_id : NP_031443.2

name	LOC674277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674277
definition	number : 4 pseudo : _no_value

name	LOC674277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674277
definition	number : 3 pseudo : _no_value

name	LOC674277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674277
definition	number : 2 pseudo : _no_value

name	LOC674277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674277
definition	number : 1 pseudo : _no_value

name	LOC100042979 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042979
definition	number : 1 pseudo : _no_value

name	LOC100042979 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042979
definition	number : 2 pseudo : _no_value

clone name	MSMg01-392O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130L15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-372D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305O16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-048F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120D21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-406G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518N02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-272C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-542E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224O17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-360J11.T7 (MSMg01no360_j11.b1)	MSMg01-360J11.TJ (MSMg01no360_j11.g1)
ACC	AG469729	AG469730
length	754	870
length of high quality (start - end)	479 (73 - 551)	---
definition	CHROMAT_FILE: MSMg01no360_j11.b1 PHD_FILE: MSMg01no360_j11.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:55:22 2005	CHROMAT_FILE: MSMg01no360_j11.g1 PHD_FILE: MSMg01no360_j11.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:55:22 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCG GAATTCTCCTTCTGTCCCTCAAGACCTTGACGTGACTCACAGACTTGAGC CAGATCCCAGGCAATGGAGTTAAAATGGAATTAAAATGCTTTGTAACTCA CATGTCCCACAACAGTACATTCAAAGAAAAGTCACTCAAGCAAAGAAACA CTGACACAGTGTTCTAGGCACCAGAGCAACACGTGCAAAAGGTGCTCACT CCAGGCCAGCGATAACTGATAGTGATATAGACTCCTCAGCGCCCCTTTAG AAGGAATTTAGAATACTAGAAATTATCTGCTTGCGTGCATAAAGACCCCA AGTGCATGGGCAGGAGTGTGATCACACACACACACACACACACACACACA CACACACACACAGGAAACAGTCGTGTGCACAAACAGGCAGGCTTAGAAGA CACAGAGTTGTGGACATTTTTTAAGGAAATGCCTTAAAAATACTTGTAAA TACTTCTTTCTTCTTTCAGTGTCTTTCCCAACTCCCTTTTTACCTCAGAG TGCAGCAGACCACTACTGCACGAGTCCTTGCAAGACGCACCAGTGTGGAT CTGATACACAACAGCTAACTCCTACAACGAAGTCACCGACTCACAGACAA CAAAGTTATATTGACCAGCCCCATGGGGAAAAGACATCTACCCGTTGAAA GGAACTCATCCACGTGATAAAAACATCCACTCTTGTTAAAACCAATCCAT TCTN	CTTTCTCCCGTTCGCCGTGCCTCGGGCGAGAGACGAGAGAAATTAGACGG GAAACAAATAACATCTTCCGCACAACCTACCCCCTTACCTTTCCCTTGTC CCTTCGTTTCGCTTTATTTTTTTGGTTAATACCTCGCTTCATAAACCCTA CATAGCATACATACAGTACCATTAACATCATTATTTTCCGTAACATCCTA AGGGGGTCATCGGCCGTGGCCGTTTAGGCGACGTAGCAGCCTCCGCCGCG CGTCGGTACGGTATACGCGCGATGCTACCAAGTATAAACACGCGACGAAT GAAGTTATTCGCATAACGACTAATAATACACGGTCTCAAACGGATAGTAC GCCTATCGACCTTACTCTATCACCGTCTATAGTGCTGACATAGCATATAC CCCAACTCCACAAACTAAAATCGCACGAATACAGGAACGGCCGATTCATA AAAATGTGAAGAGAGAATTACATAAGTAAGNGAAGGGAAATGAGAAAAAG TAAACGTGAGAGAAGAAGAAATTAGAGGAGAGGGAGGCGCAGGGGGAGCA GTAAATCATGATAACAAAACGAACAACAGAACAGAAATTATCTGTATCGT ATAGACTGTAATGATAATAAAGAAGTGTTACCGAAGTCAGTAACGTAGAG AAAAACTTGAATTTAAAGCGAAGAATCGTGGTAGAGCGAGGAGAGCGCAC CTGGTCATACAGATAAGACACGTATCAAGTATCCGTGACGATCGATTTTA CCAATTTAGAGTGAGTAAGTGTTCACATAACAATCAAATAGGACAAGAGA TCGATAACAAACGTACTTTACAAATAGCACAAAAATAATTATACACGCTG GTAACTAATAACAAGCATCG
quality values	Open. Hide. 6 8 8 8 9 9 10 10 15 19 12 8 6 6 6 10 15 22 22 20 20 24 30 37 37 46 28 30 31 30 27 25 21 12 11 11 15 13 9 9 7 8 8 10 10 12 16 26 30 36 30 30 28 28 31 31 59 47 47 44 27 23 9 9 9 14 12 11 8 10 10 8 13 19 39 39 48 47 53 53 53 50 50 50 53 53 53 57 53 50 47 48 50 53 48 48 48 43 39 48 48 54 48 53 54 68 68 68 68 68 68 68 68 68 48 57 47 47 47 57 57 46 47 47 46 57 57 51 51 50 50 50 50 68 50 51 50 50 50 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 68 68 68 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 68 68 68 27 27 11 11 12 34 34 68 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 59 59 57 54 54 57 57 57 57 57 57 57 54 54 57 57 57 57 57 57 57 57 57 57 57 57 59 68 68 59 59 44 44 33 26 25 30 30 42 39 42 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 54 54 54 54 57 57 59 59 59 59 59 57 57 57 59 59 68 68 59 59 59 59 59 59 59 59 59 53 53 53 53 53 53 59 57 53 53 50 50 50 59 30 23 12 13 10 10 10 10 10 15 15 24 24 39 41 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 57 43 47 43 43 43 48 47 47 43 47 47 57 57 57 57 57 59 59 54 54 48 57 48 48 47 57 57 57 54 57 57 57 57 59 59 43 42 42 31 31 28 33 33 33 32 42 42 37 35 35 43 43 44 50 50 54 54 57 57 38 32 20 20 27 41 44 52 57 52 54 54 52 52 48 44 43 43 37 35 35 43 43 43 50 41 41 20 20 16 28 18 27 36 40 37 42 33 33 35 42 44 42 42 35 35 35 36 36 37 59 59 57 54 47 47 28 28 23 31 31 37 37 36 36 37 39 39 46 46 54 54 57 47 46 43 43 43 43 43 48 48 47 47 35 39 39 43 43 48 48 57 57 57 59 48 48 43 37 37 28 22 12 14 14 20 20 22 35 31 31 33 32 28 36 32 37 37 43 43 50 39 44 43 36 36 36 28 28 15 15 11 12 12 11 11 11 11 11 14 18 14 26 21 25 28 32 30 28 19 18 11 15 15 21 10 10 9 11 11 17 22 15 8 8 8 10 10 11 10 10 10 8 8 8 9 9 13 10 13 13 12 10 10 10 11 10 9 8 8 10 10 9 8 12 10 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 11 10 10 10 10 8 8 8 8 8 8 8 8 8 10 10 10 10 12 12 10 10 9 9 9 9 9 9 8 9 9 9 9 10 9 7 8 7 8 8 8 9 11 12 12 14 10 10 10 10 9 11 10 10 10 13 10 8 8 8 8 8 8 9 8 8 8 8 8 8 8 9 12 8 10 6 6 8 8 10 10 8 9 8 8 8 8 8 6 8 8 8 9 8 10 8 8 9 9 9 9 9 9 8 8 6 7 8 8 13 9 8 8 6 6 8 8 8 8 9 10 9 9 3 0	Open. Hide. 9 9 9 9 9 9 10 10 8 8 8 8 8 8 10 11 8 8 6 6 8 8 10 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 6 6 8 6 6 6 6 8 6 6 6 8 11 8 8 7 9 8 8 10 8 8 7 7 8 8 8 8 8 8 8 8 6 8 10 8 8 8 8 6 6 8 8 8 8 10 8 8 8 8 10 10 20 13 8 9 8 8 8 9 9 12 9 9 10 10 10 10 10 10 9 9 9 9 10 10 8 8 8 10 12 12 8 9 8 8 8 10 10 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 6 7 9 9 8 8 8 7 10 8 8 8 8 8 8 8 8 8 8 6 6 8 8 9 10 10 11 9 9 9 8 8 10 12 8 8 8 6 6 6 7 8 8 10 11 6 6 6 6 8 8 8 8 8 8 8 8 8 6 7 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 6 6 8 8 10 9 10 8 8 8 10 8 8 9 8 8 6 8 8 8 11 11 11 10 11 11 11 11 6 8 8 6 8 8 8 7 7 8 6 9 9 8 8 7 6 8 8 11 11 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 10 10 10 10 8 8 8 8 8 8 10 13 12 12 9 10 11 11 11 11 9 9 8 8 8 8 8 8 8 8 8 10 10 10 10 10 9 9 12 19 19 10 8 8 8 8 7 6 6 6 6 6 10 10 13 12 10 8 8 8 8 8 10 10 10 13 15 12 10 10 11 12 11 11 8 6 6 6 8 8 9 8 8 6 6 8 8 8 10 9 8 7 8 6 10 6 6 8 6 9 7 7 7 7 8 8 10 9 10 10 8 8 8 8 8 8 8 9 9 11 9 9 9 8 8 10 9 10 9 12 13 11 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 12 12 11 11 11 8 8 8 8 6 6 6 6 8 8 9 9 10 10 8 8 8 8 6 8 7 7 10 9 7 10 8 10 10 13 10 8 8 8 8 10 8 8 8 8 3 0 3 9 9 11 13 10 10 11 11 11 9 9 10 10 10 8 8 6 7 10 12 8 6 6 8 8 8 8 8 7 9 9 9 8 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 8 8 8 8 10 8 8 8 8 6 8 8 8 8 8 8 8 8 6 6 6 6 10 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 9 9 9 8 8 10 13 18 15 14 12 10 8 8 8 8 8 8 8 8 8 8 8 9 10 10 8 8 8 8 6 6 6 6 10 11 11 11 11 11 8 8 8 8 8 8 8 8 8 8 8 8 11 12 12 16 10 9 9 11 8 8 9 9 9 9 10 16 11 11 9 9 9 10 9 10 10 9 10 10 10 10 10 11 11 8 10 8 8 8 8 8 8 8 10 8 10 10 10 10 6 6 6 8 9 6 6 6 6 8 8 10 8 8 8 8 9 9 10 9 9 8 8 6 6 6 6 10 8 9 9 9 10 8 8 8 8 8 8 9 9 12 9 10 8 8 6 6 8 8 6 6 8 8 8 8 6 6 6 6 8 8 8 10 11 17 10 8 8 8 8 8 9 10 10 10 8 6 6 10 8 10 9 9 10 10 10 9 9 10 11 11 11 11 10 10 10 10 9 9 9 8 8 8 10 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 11 10 9 9 7 12 9 9 8 8 8 8 8 7 7 9 10 10 10 10 8 8 6 6 6 6 8 12 11 10 10 10 8 8 8 8 8 6 8 6 6 8 6 8 6 6 6 6 8 6 6 6 6 8 8 8 6 6 6 8 6 9 8 8 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no360_j11.b1 MSMg01no360_j11.b1 CHROMAT_FILE:
MSMg01no360_j11.b1 PHD_FILE: MSMg01no360_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:22 2005
         (479 letters)



>mm_chr19_53255219_53256103
          Length = 885

 Score =  868 bits (449), Expect = 0.0
 Identities = 476/493 (96%), Gaps = 14/493 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaccttgacgtgactcacagacttgagccagatcccaggcaatggagttaaaatggaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gaccttgacgtgactcacagacttgagccagatcccaggcaatggagttaaaatggaatt 447

                                                                       
Query: 61  aaaatgctttgtaactcacatgtcccacaacagtacattcaaagaaaagtcactcaagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aaaatgctttgtaactcacatgtcccacaacagtacattcaaagaaaagtcactcaagca 387

                                                                       
Query: 121 aagaaacactgacacagtgttctaggcaccagagcaacacgtgcaaaaggtgctcactcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 386 aagaaacactgacacagtgttctaggcaccagagcaacacgtgcaaaaggtgctcacgcc 327

                                                                       
Query: 181 aggccagcgataactgatagtgatatag------actcctcagcgcccctttagaaggaa 234
           ||||||||||||||||||||||||||||      ||||||||||||||||||||||||||
Sbjct: 326 aggccagcgataactgatagtgatatagaccagtactcctcagcgcccctttagaaggaa 267

                                                                       
Query: 235 tttagaatactagaaattatctgcttgcgtgcataaagaccccaagtgcatgggcaggag 294
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tttagaatactagaaacaatctgcttgcgtgcataaagaccccaagtgcatgggcaggag 207

                                                                       
Query: 295 tgtgat--------cacacacacacacacacacacacacacacacacacacacaggaaac 346
           ||||||        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tgtgatcacacacacacacacacacacacacacacacacacacacacacacacaggaaac 147

                                                                       
Query: 347 agtcgtgtgcacaaacaggcaggcttagaagacacagagttgtggacattttttaaggaa 406
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agtcgtgtgcacaaacaggcaggcttagaagacacagagttgtggacattttttaaggaa 87

                                                                       
Query: 407 atgccttaaaaatacttgtaaatacttctttcttctttcagtgtctttcccaactccctt 466
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  atgccttaaaaatacttgtaaatacttctttcttctttcagtgtctttcccaactccctt 27

                        
Query: 467 tttacctcagagt 479
           |||||||||||||
Sbjct: 26  tttacctcagagt 14


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 885
Length adjustment: 10
Effective length of query: 469
Effective length of database: 875
Effective search space:   410375
Effective search space used:   410375
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information