Query= MSMg01no361_f19.b1 MSMg01no361_f19.b1 CHROMAT_FILE:
MSMg01no361_f19.b1 PHD_FILE: MSMg01no361_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:23 2005
(551 letters)
>mm_chr19_20587912_20588862
Length = 951
Score = 640 bits (331), Expect = 0.0
Identities = 334/335 (99%)
Strand = Plus / Minus
Query: 5 gaattctgttatctgcacatcacatcacaacacccctgcctagaaataggcttgtacact 64
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 335 gaattctgttatctgcacatcacatcacaacccccctgcctagaaataggcttgtacact 276
Query: 65 tagacataggaaacagacttggtgtgaaaagcccccagaataccctgctcctcactgagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tagacataggaaacagacttggtgtgaaaagcccccagaataccctgctcctcactgagg 216
Query: 125 tgccccactctaagaaggatagctatttctaaaatccaggagctatcacaataccttaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tgccccactctaagaaggatagctatttctaaaatccaggagctatcacaataccttaat 156
Query: 185 actgttaaaggctgacatggtactggcagcaagaatatgacgtttcccttctgaacataa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 actgttaaaggctgacatggtactggcagcaagaatatgacgtttcccttctgaacataa 96
Query: 245 tttcaggaaaagacaaatgcacgcaaaacattctgactttgatagaacaagacagcaacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tttcaggaaaagacaaatgcacgcaaaacattctgactttgatagaacaagacagcaacc 36
Query: 305 cagaatgctctgcaatcacatccctgcaaacaaaa 339
|||||||||||||||||||||||||||||||||||
Sbjct: 35 cagaatgctctgcaatcacatccctgcaaacaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_f19.g1 MSMg01no361_f19.g1 CHROMAT_FILE:
MSMg01no361_f19.g1 PHD_FILE: MSMg01no361_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:23 2005
(460 letters)
>mm_chr19_20378563_20379422
Length = 860
Score = 791 bits (409), Expect = 0.0
Identities = 449/463 (96%), Gaps = 4/463 (0%)
Strand = Plus / Plus
Query: 1 atgaaacaaggaggtggaatgttaaagaagtgcttccacggttaagagcagttactgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 atgaaacaaggaggtggaatgttaaagaagtgcttccacggttaagagcagttactgcag 258
Query: 61 aggacatagtttctgttactagtacccgtcatgaaccttacaacctgcaggaacttcagt 120
|||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 259 aggatgtagtttctgttactagtacccttcatgtaccttacaacctgcaggaacttcagt 318
Query: 121 ttcaggggatcttgcatcctcttcctgtctacgcatgaatcagtattgtgcatggggaat 180
|||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttcacgggatcttacatcttcttcctgtctacgcatgaatcagtattgtgcatggggaat 378
Query: 181 atacatacatgcagacaaaatactcacacacataaaat--aaaaaaattaaagcctcttt 238
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 379 atacatacatgcagacaaaatattcacacacataaaataaaaaaaaattaaagcctcttt 438
Query: 239 taaaactgttgagagggtcacaggatccaggggtgttgaaggggaagaggatgatggttg 298
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 taaagctgtggagagggtcacaggatccaggggtgttgaaggggaagaggatgatggttg 498
Query: 299 tactagaaatgcactctattcatttataaattgccaaagaataaataaggcttgtgag-g 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 499 tactagaaatgcactctattcatttataaattgccaaagaataaataaggcttgtgagag 558
Query: 358 aaaaatctgcttccagaaaagtttatgcaattcaagaaaggaaaaacatcacatctcttc 417
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aaaa-tctgcttccagaaaagtttatgcaattcaagaaaggaaaaacatcacatctcttc 617
Query: 418 atggaaaagacttagaaacatataatgttaaggaaatatacta 460
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 atggaaaagacttagaaacatataatgttaaggaaatatacta 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
