Query= MSMg01no365_o12.b1 MSMg01no365_o12.b1 CHROMAT_FILE:
MSMg01no365_o12.b1 PHD_FILE: MSMg01no365_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:32 2005
(180 letters)
>mm_chr19_46001490_46002069
Length = 580
Score = 329 bits (170), Expect = 7e-95
Identities = 176/178 (98%)
Strand = Plus / Minus
Query: 1 taaggttataatcctcatgtcgaagtgtgaagaagtatggagtacacagggagacttagc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 taaggttataatcctcatggcgaagtgtgaagaagtatggagtacacagggagacttagc 319
Query: 61 gcccagagccagtacctgggtcagaagtaggcaaacttctttgtttgtgtgagtgctgtg 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 318 gcccagagccagtacctgggtcagaagtaggcaagcttctttgtttgtgtgagtgctgtg 259
Query: 121 agtactgagtgttgaagaaaggtgcttgtccaagggggaagcagtctcgctgcgagca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agtactgagtgttgaagaaaggtgcttgtccaagggggaagcagtctcgctgcgagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 580
Length adjustment: 8
Effective length of query: 172
Effective length of database: 572
Effective search space: 98384
Effective search space used: 98384
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no365_o12.g1 MSMg01no365_o12.g1 CHROMAT_FILE:
MSMg01no365_o12.g1 PHD_FILE: MSMg01no365_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:33 2005
(239 letters)
>mm_chr19_45849806_45850444
Length = 639
Score = 443 bits (229), Expect = e-129
Identities = 237/241 (98%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 1 tgactaaattatttcttactactaacatccttcctgaacaagaaaagaaagtgaccaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgactaaattatttcttactactaacatccttcctgaacaagaaaagaaagtgaccaaag 260
Query: 61 ttttgtggaggtgacctgtgagaggcgactgaaagagactgaacctctttcaatggaaga 120
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ttttgtggaggtgacctgtgagaggcgactgaaagagactgaacct--ttcaatggaaga 318
Query: 121 gagctagttatgtagtacagctgctgcactttctaggctccatgagagtgggaggagtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gagctagttatgtagtacagctgctgcactttctaggctccatgagagtgggaggagtga 378
Query: 181 gaacgggaga--ccagagccatgggcagaaagaggaacaagtaggagggagtgagacagg 238
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaacgggagagaccagagccatgggcagaaagaggaacaagtaggagggagtgagacagg 438
Query: 239 a 239
|
Sbjct: 439 a 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
