NTTTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCCAAAGTATGCGAGGTATTTTTAAAAAAATTCTTATCAAG
CCTGCCCAGTGTGGTAGTTATTTATTATATTATTGTTAAGCCTTGTATGC
CTGTAATATTTCATAGTAACTTTTATCACAATGATTGTTTCCCCTTTGCC
TAAGCCTTAGAGGTCTCTTAGATCTCACAATGAACATGGAACCAGAACCC
CAGAGACCGCCCAAGTAGCAGAAGTTTCTTTTCTTTTTTTTCCCTAAACA
CTAAACACCCTTTGGTGGCTATTTTGGGTTTCCTTTCCGACCCAGTATTT
CAGGAGTGAGCTGCATGCAGGTCACAGGAGTTGAGCCTGGAAAATCCCAG
TGGTCGTCAGTCTGCCCAGTGAGAGCTCCACACTGAGTGAGTCATTGTTA
CTGCAGTCCTGACCTTGCCTGACCTCCTTAGTGTTAGGGCCACAGCAGAA
CAGAACTCCTGACTGAGAGAGCTGCCGATAAGGATAATGGCCTTAGCTGG
GCCCAGGGCACATGACCGCCCTTGGAGGAATGTAATGAAAAAGGCCAAAC
TCCCCCCCGGCCCATGTCCTTCCCCTGGGGGGGGGATTTTCCCCATAAGT
TTGACCCTTTTATCCATGATGGAAAGTGTAAAATTCCCCTTGATGGCTAA
ATTTTCTGCTTTCCCCTTTCCCATCATTTAAAAATTCTCGCTATTTTTTT
TTT

NCCCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTT
ATCATGAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACAA
GATGATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACAT
TGATGGATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCT
ACTTGGTCAGGATGGATGATTTCTTTAATGTGTTCTTGGATTCGGTTAGC
GAGAATTTTATTAAGGATTTTTGCATCTTTATTCATAAGAGAAATTGGTC
TGAAGTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTA
ATAGTGGCTTCATAAAATGAGCTGGGTAGAGTACCTTCTACTTCTATCTT
GTGAAATAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGAT
AGAACTCTGCACTAAACCCATCTGGTCCTGTGCTTTTTTTTGGTTGGGAG
ACTATTAATAACTGCTTCCATTTTCTTTAGGTGAATTGGGACCGTTTAGA
AAGCCCCCTTGCTCCTGAATCCATTTTGTTACCCCGGATTTCCGCCCCAA
ATCTGGCCTTTTTTTTTTGTTTTTCCAGGTTTGTTGTAAATAAATCTTTT
ATTAATAATCGCATTTCCTTTTCCACTCCCCTCTATTCTTCGCCTTATTT
TCTTCCTCCCTCG

Query= MSMg01no366_i18.b1 MSMg01no366_i18.b1 CHROMAT_FILE:
MSMg01no366_i18.b1 PHD_FILE: MSMg01no366_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:25 2005
         (432 letters)



>mm_chr19_24646263_24647096
          Length = 834

 Score =  770 bits (398), Expect = 0.0
 Identities = 422/430 (98%), Gaps = 2/430 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcccaaagtatgcgaggtatttt-taaaaaaattcttatcaagcctgcccagtgtg 63
           |||||||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||
Sbjct: 634 gaattcccaaagtaagtgaggtattttaaaaaaaaattcttatcaagcctgcccagcgtg 575

                                                                       
Query: 64  gtagttatttattatattattgttaagccttgtatgcctgtaatatttcatagtaacttt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gtagttatttattatattattgttaagccttgtatgcctgtaatatttcatagtaacttt 515

                                                                       
Query: 124 tatcacaatgattgtttcccctttgcctaagcctt-agaggtctcttagatctcacaatg 182
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 514 tatcacaatgattgtttcccctttgcctaagccttaagaggtctcttagatctcacaatg 455

                                                                       
Query: 183 aacatggaaccagaaccccagagaccgcccaagtagcagaagtttcttttcttttttttc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aacatggaaccagaaccccagagaccgcccaagtagcagaagtttcttttcttttttttc 395

                                                                       
Query: 243 cctaaacactaaacaccctttggtggctattttgggtttcctttccgacccagtatttca 302
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 394 cctaaacactaaacaccctttggtggctatttcgggtttcctttccgacccagtatttca 335

                                                                       
Query: 303 ggagtgagctgcatgcaggtcacaggagttgagcctggaaaatcccagtggtcgtcagtc 362
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 334 ggagtgagctgcatgcaggtcacgggagttgagcctggaaaatcccagtggtcgtcagtc 275

                                                                       
Query: 363 tgcccagtgagagctccacactgagtgagtcattgttactgcagtcctgaccttgcctga 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgcccagtgagagctccacactgagtgagtcattgttactgcagtcctgaccttgcctga 215

                     
Query: 423 cctccttagt 432
           ||||||||||
Sbjct: 214 cctccttagt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 834
Length adjustment: 9
Effective length of query: 423
Effective length of database: 825
Effective search space:   348975
Effective search space used:   348975
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)