NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTTATCTATATGTCAACAAACCCCACATTTCTATCTTGT
GACCAGCGCGCCTCTTGAGACACTCAGGCAGCTGCCTTCTGGACATGTCT
GCTGGGACGCCTCAGAGACGCCACAACTGTGTCTCAAAACAAAGTTTTCC
TTTCTCCCTTAAACCTCTTCCACTTGAGATTTCTCTTATCTCAGACGATG
GAAATTCTCTCCCACTTCAGTCGAGTTGTCATGAATTCATCTCATTCACA
GACCTGCTCCGTCCCATAGCCTTCTCCTGGCTGGGAGTCTTGCTACAGCC
CCCTCCTTGGTCTTTTTTATCAAACTTTCTTTCCAAGAGACAATTCTCAG
GAACCAGAATGGCTTTCATAGAACGCTTCTGAGCTCTACCTAATGTCCTA
CCAAGCCTCCGGTTTCACTCTGATAAATGGCCCTAAAGGTCCTGCCCAGG
CAAGGGTCTCAATGCTTCTCCGACTCTGGATCCTTTCGCATCCTTCTTCA
TCCACCCCAATCCAGTGACATGGCTGTTTCTCCTTAATACTCGTTCCGTT
CTGACCATTCTTCCCATCCATTCATCCAAATTCCTTGGCTCCTGTTATTT
ACCAATTTTACGTTTCACCTATTTTTATTGCAGCTCAATTTTGCCCTTTA
TTTGCGTTAAATATGGTGACTTCTCTTCCTTTCCCATTTCCTAATTTCCC
TAATCCTATTCCGTTTTCTCCTTTTC

TTTTCCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAGTCTCCTGGCTTGGGA
TGGGAACTGACAGATGTCTGACTCCCAAATAATGAATGTATAACAAGTTC
TTCAATAGGCAACACCTACAGGGTGCTGCTTCCTGCCAAAAGCCACTCTG
AACACACTGCATGAGTTGGACCAGCCTTTGTCATCACCTTGGCCCAGAGG
CTCTGCAGCTATCACACCATATCACAGGTGAGGAAACTGAGGCACAGAGG
CTCAGAGACTTCCAAGGCTATCCATCCTTCTGGCACATGGAGAGGCTGGG
ACTACTCAGTCCAAATCTCAGAACTATTGCTCCTATCTGCAACAGATCAT
GAGACTTTCCCATGCTGCAGCTCACAGACATTTTGACAGACTTAAAGAGC
ACGAATTTGTAGAGTTGTGGGCACAGGAAAGCTGGCTCCACGTGAAGACC
TATGAGGCAGATACACTTGGTCTGCTGAGCTGATGTTCCCGAGGAAGTAC
ACAGATCCCAGCCTGTAGTTATTGTTTCCCAACCCTATCATATTATTTGT
CTGTTAACCCCAGTTGTCCCCGCCCAACCCATTTCCTCGGTTTTTTTTTT
TTTTTTTTTTCTAAACTCACATCTCCCCCAACCCTTTTTCTCTTCCCATT
TCTCCCCCTTTTTTCCCCCCCCCCACTTTTATTCTACTTATCAAAACCCC
C

Query= MSMg01no377_n03.b1 MSMg01no377_n03.b1 CHROMAT_FILE:
MSMg01no377_n03.b1 PHD_FILE: MSMg01no377_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:08 2005
         (458 letters)



>mm_chr19_16137319_16138176
          Length = 858

 Score =  826 bits (427), Expect = 0.0
 Identities = 433/435 (99%)
 Strand = Plus / Minus

                                                                       
Query: 24  tcaacaaaccccacatttctatcttgtgaccagcgcgcctcttgagacactcaggcagct 83
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 tcaacaaaccccacatttctatcttgtgaccagcgcgcctcttgagacactcaggcagct 799

                                                                       
Query: 84  gccttctggacatgtctgctgggacgcctcagagacgccacaactgtgtctcaaaacaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gccttctggacatgtctgctgggacgcctcagagacgccacaactgtgtctcaaaacaaa 739

                                                                       
Query: 144 gttttcctttctcccttaaacctcttccacttgagatttctcttatctcagacgatggaa 203
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 738 gttttcctttctcccttaaacctcttccacttgagattcctcttatctcagacgatggaa 679

                                                                       
Query: 204 attctctcccacttcagtcgagttgtcatgaattcatctcattcacagacctgctccgtc 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 attctctcccacttcagtcgagttgtcatgaattcatctcattcacagacctgctccgtc 619

                                                                       
Query: 264 ccatagccttctcctggctgggagtcttgctacagccccctccttggtcttttttatcaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ccatagccttctcctggctgggagtcttgctacagccccctccttggtcttttttatcaa 559

                                                                       
Query: 324 actttctttccaagagacaattctcaggaaccagaatggctttcatagaacgcttctgag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 actttctttccaagagacaattctcaggaaccagaatggctttcatagaacgcttctgag 499

                                                                       
Query: 384 ctctacctaatgtcctaccaagcctccggtttcactctgataaatggccctaaaggtcct 443
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 498 ctctacctaatgtcctaccaagcctccggtttcactctgataaatggccctaaaggccct 439

                          
Query: 444 gcccaggcaagggtc 458
           |||||||||||||||
Sbjct: 438 gcccaggcaagggtc 424


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space:   379904
Effective search space used:   379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no377_n03.g1 MSMg01no377_n03.g1 CHROMAT_FILE:
MSMg01no377_n03.g1 PHD_FILE: MSMg01no377_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:08 2005
         (364 letters)



>mm_chr19_15949850_15950613
          Length = 764

 Score =  665 bits (344), Expect = 0.0
 Identities = 359/364 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagtctcctggcttgggatgggaactgacagatgtctgactcccaaataatgaatgtat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtctcctggcttgggatgggaactgacagatgtctgactcccaaataatgaatgtat 260

                                                                       
Query: 61  aacaagttcttcaataggcaacacctacagggtgctgcttcctgccaaaagccactctga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaagttcttcaataggcaacacctacagggtgctgcttcctgccaaaagccactctga 320

                                                                       
Query: 121 acacactgcatgagttggaccagcctttgtcatcaccttggcccagaggctctgcagcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacactgcatgagttggaccagcctttgtcatcaccttggcccagaggctctgcagcta 380

                                                                       
Query: 181 tcacaccatatcacaggtgaggaaactgaggcacagaggctcagagacttccaaggctat 240
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tcacaccatatcacaggtgaggaaactgaggcacagaggttcagagacttccaaggctat 440

                                                                       
Query: 241 ccatccttctggcacatggagaggctgggactactcagtccaaatctcagaactattgct 300
           | |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 ctatccttctggcacacggagaggctgggactacttagtccaaatctcagaactattgct 500

                                                                       
Query: 301 cctatctgcaacagatcatgagactttcccatgctgcagctcacagacattttgacagac 360
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 cctatctgcaacagatcatgagactttcccatgctgcagctcagagacattttgacagac 560

               
Query: 361 ttaa 364
           ||||
Sbjct: 561 ttaa 564


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space:   268025
Effective search space used:   268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)