Query= MSMg01no379_j24.b1 MSMg01no379_j24.b1 CHROMAT_FILE:
MSMg01no379_j24.b1 PHD_FILE: MSMg01no379_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:26 2005
(427 letters)
>mm_chr19_10250759_10251585
Length = 827
Score = 226 bits (117), Expect = 2e-63
Identities = 120/121 (99%)
Strand = Plus / Minus
Query: 307 tcattgtcttctttaaaaaattatttatttatttgtattttatgttcattggtgttttgc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tcattgtcttctttaaaaaattatttatttatttgtattttatgttcattggtgttttgc 156
Query: 367 ttacatgtatgtctgtgtgagagtgttggagctcccagaactagagttataaacagtcac 426
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 155 ttacatgtatgtctgtgtgagagtgttggagctcccagaactagagttacaaacagtcac 96
Query: 427 t 427
|
Sbjct: 95 t 95
Score = 221 bits (114), Expect = 9e-62
Identities = 114/114 (100%)
Strand = Plus / Minus
Query: 5 gaattctcttccttaccatttattcttctgtgtagttttggaaggctcttcagatctagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaattctcttccttaccatttattcttctgtgtagttttggaaggctcttcagatctagg 256
Query: 65 gtcctgtagggcaagcaccatctccagctgtgattccctttcattgtcttcttt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gtcctgtagggcaagcaccatctccagctgtgattccctttcattgtcttcttt 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_j24.g1 MSMg01no379_j24.g1 CHROMAT_FILE:
MSMg01no379_j24.g1 PHD_FILE: MSMg01no379_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:26 2005
(410 letters)
>mm_chr19_10080410_10081219
Length = 810
Score = 770 bits (398), Expect = 0.0
Identities = 407/410 (99%)
Strand = Plus / Plus
Query: 1 tcttaatagttgtcctggggatcacctttactgtctttatcttttacttatttctgacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttaatagttgtcctggggatcacctttactgtctttatcttttacttatttctgacta 260
Query: 61 tgtagatctggcctggagctcagagatccacctgccttggactcctgagtgctgagatca 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtagagctggcctggagctcagagatccacctgccttggactcctgagtgctgagatca 320
Query: 121 aaggcatgcgccaccacccctggcttaagttcatctttagctactttggagttcaaagct 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggcatgcaccaccacccctggcttaagttcatctttagctactttggagttcaaagct 380
Query: 181 actttgggttccataagaacctgcctcaaaaaaaaataagtaaatgaataaataaaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actttgggttccataagaacctgcctcaaaaaaaaataagtaaatgaataaataaaatat 440
Query: 241 gaaaaagtttctgacgctaagctagggcccattccttgaacacatgagcctttgggtgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaaagtttctgacgctaagctagggcccattccttgaacacatgagcctttgggtgga 500
Query: 301 cacatcagagccaaactacagcacatgtgtagataactcaaaagcacatacaaccacatc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacatcagagccaaactacagcacatgtgtagataactcaaaagcacatacaaccacata 560
Query: 361 aagatttcaccctctaatcagcattatgtgttaaacaggagactggttgg 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagatttcaccctctaatcagcattatgtgttaaacaggagactggttgg 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
