Query= MSMg01no382_f22.b1 MSMg01no382_f22.b1 CHROMAT_FILE:
MSMg01no382_f22.b1 PHD_FILE: MSMg01no382_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:05 2005
(522 letters)
>mm_chr19_16640472_16641393
Length = 922
Score = 996 bits (515), Expect = 0.0
Identities = 518/519 (99%)
Strand = Plus / Plus
Query: 4 ggaattctgggtcaaagcttttctgtgactcagcaatagagctaaggcatctccatatgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgggtcaaagcttttctgtgactcagcaatagagctaaggcatctccatatgt 263
Query: 64 cctgtgaagatctgtcacctggaccagtggtgacagatgaaccaatcagacttgatgcca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctgtgaagatctgtcacctggaccagtggtgacagatgaaccaatcagacttgatgcca 323
Query: 124 ctgttcattccttctgtgaacagatcacaggcaagttcccccaggagacaactgcttcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgttcattccttctgtgaacagatcacaggcaagttcccccaggagacaactgcttcaa 383
Query: 184 aaatggtacttttccatcatcattgtttgaaatgtcatttttgctaaaggaaggaaaaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaatggtacttttccatcatcattgtttgaaatgtcatttttgctaaaggaaggaaaaaa 443
Query: 244 caggaaattccttccctatgtactcatcttgggggcactgtaaaagattccgagggcagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caggaaattccttccctatgtactcatcttgggggcactgtaaaagattccgagggcagt 503
Query: 304 ggagacatgccactgtcccccgtgcagtatcccagtgtgcagtggagacatgccactgtc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggagacatgccactgtcccccgtgcagtatcccagtgtgcagtggagacatgccactgtc 563
Query: 364 cccattgcagtatcccagtgtgcagcagtacaacgtgccatcatctttcttttcttgaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cccattgcagtatcccagtgtgcagcagtacaacgtgccatcatctttcttttcttgaca 623
Query: 424 cagtttcctgccgagcaagcccagagtttccctggcatcgggcactcccttgtcctttca 483
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 624 cagtttcctgccgagcaagcccagagtttccctggcattgggcactcccttgtcctttca 683
Query: 484 tgaaacatcttatccaggaagaaagccagtctcttaaag 522
|||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgaaacatcttatccaggaagaaagccagtctcttaaag 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_f22.g1 MSMg01no382_f22.g1 CHROMAT_FILE:
MSMg01no382_f22.g1 PHD_FILE: MSMg01no382_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:06 2005
(443 letters)
>mm_chr19_16777154_16777997
Length = 844
Score = 617 bits (319), Expect = 0.0
Identities = 325/327 (99%), Gaps = 2/327 (0%)
Strand = Plus / Minus
Query: 1 tttgaaaa-aatgtcgatggctaagttattttgttagtaattcttgaataataaggaatt 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tttgaaaacaatgtcgatggctaagttattttgttagtaattcttgaataataaggaatt 371
Query: 60 taagcagactatgtgttgaaggaagtggtgacaaatactaaagtgtgagataagaaaacc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 taagcagactatgtgttgaaggaagtggtgacaaatactaaagtgtgagataagaaaacc 311
Query: 120 ctgaatcagttctttttgagtcagtatgtgagcacttagagtttaacaagagagaacatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctgaatcagttctttttgagtcagtatgtgagcacttagagtttaacaagagagaacatt 251
Query: 180 ttcttcattgctggaccaagtttgttatcaatattattattcattttttttcttttttta 239
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 250 ttcttcattgctggaccaagtttgttatcaatattattattcattttttt-cttttttta 192
Query: 240 tttgttattttatttattgacatttcaaatgttatctcccttcccagtttcccctccaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tttgttattttatttattgacatttcaaatgttatctcccttcccagtttcccctccaca 132
Query: 300 aatccccatcccctcccttctccccgc 326
|||||||||||||||||||||||||||
Sbjct: 131 aatccccatcccctcccttctccccgc 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 844
Length adjustment: 10
Effective length of query: 433
Effective length of database: 834
Effective search space: 361122
Effective search space used: 361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
