Query= MSMg01no383_e04.b1 MSMg01no383_e04.b1 CHROMAT_FILE:
MSMg01no383_e04.b1 PHD_FILE: MSMg01no383_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:17 2005
(548 letters)
>mm_chr19_16041766_16042713
Length = 948
Score = 1015 bits (525), Expect = 0.0
Identities = 540/545 (99%), Gaps = 1/545 (0%)
Strand = Plus / Plus
Query: 5 gaattctctctataaataccgtgaattttaataataataaaaaaaa-gcagctgtggcat 63
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 204 gaattctctctataaatatcgtgaattttaataataataaaaaaaaagcagctgtggcat 263
Query: 64 ttatcttcaggggatgtgtaatgcttgcaactgaacctaaggccttatatgctggccagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttatcttcaggggatgtgtaatgcttgcaactgaacctaaggccttatatgctggccagg 323
Query: 124 aaactggtttgccattaaagctgtatcccgtagctgtctttaaataaaataaataaaata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaactggtttgccattaaagctgtatcccgtagctgtctttaaataaaataaataaaata 383
Query: 184 ggtagctgcccttcaaacattaatgacgttttgagaaggcgccatctgggaactagaaat 243
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 384 ggtagctgcccttcaaacattaatgacattttgagaaggcgccatctgggaactagaaat 443
Query: 244 ctgggccctaaccacacacaaactagctggaccttacgtccttgctctcagatatgtgac 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgggccctaaccacacacaaactagctggaccttacgtccttgctctcagatatgtgaa 503
Query: 304 aatcaaatctctgctgttttaagccaataagcagacaaacaaacaaataacaaatggata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aatcaaatctctgctgttttaagccaataagcagacaaacaaacaaataacaaatggata 563
Query: 364 gccagttctagatttgtaagttctgtaccaagacagacctagttttaagcactcactatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gccagttctagatttgtaagttctgtaccaagacagacctagttttaagcactcactatg 623
Query: 424 gggttgctggtgtggctcagtgatagcatgcatgttgaagagtatgaggttttgagttca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gggttgctggtgtggctcagtgatagcatgcatgttgaagagtatgaggttttgagttca 683
Query: 484 accccaggtcccaccagcttcccgtaattacatgtgtatcatgtaacccacaagaaaagg 543
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 accccaggtcccaccagcttcccgtaattacatgtgaatcatgtaacccacaagaaaagg 743
Query: 544 caaga 548
|||||
Sbjct: 744 caaga 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_e04.g1 MSMg01no383_e04.g1 CHROMAT_FILE:
MSMg01no383_e04.g1 PHD_FILE: MSMg01no383_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:17 2005
(533 letters)
>mm_chr19_16217360_16218292
Length = 933
Score = 992 bits (513), Expect = 0.0
Identities = 528/533 (99%)
Strand = Plus / Minus
Query: 1 aagactagcctgaaaaagaaaaaagcctgcaagagatttaaagatggtgacctccttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 aagactagcctgaaaaagaaaaaagcctgcaagagatttaaagatggtgacctccttgat 674
Query: 61 agtgcctaggctgaaatgcctaagttctttctgcaagacaagcctctacatgaggatgaa 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 agtgccaaggctgaaatgcctaagttctttctgcaagacaagcctctacatgaggatgaa 614
Query: 121 tctctctggcaacaatggctcgtgatactgcttatcttcttgttgctttgggcaactgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tctctctggcaacaatggctcgtgatactgcttatcttcttgttgctttgggcaactgaa 554
Query: 181 atgtgcttggctgtaggagaaacaagccaaataaaagcatttcctggacaaggatggctc 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 atgtgctcggctgtaggagaaacaagccaaataaaagcatttcctggacaaggatggctc 494
Query: 241 aagacactccctcataacttattacaggagagcagggttctcagaacatattgctaagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aagacactccctcataacttattacaggagagcagggttctcagaacatattgctaagta 434
Query: 301 cctcaaagagttgtcagaaaacaaaaaataagaaaagccgtggtgcagccgcgcggcaaa 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 433 cctcaaagagttgtcagaaaacaaaaaataagaaaagccgcggtgcagccgcgcggcaaa 374
Query: 361 ctttctttttcgatgtgaatggctctttctaagactctgctgtgcatgagctctgtgcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctttctttttcgatgtgaatggctctttctaagactctgctgtgcatgagctctgtgcta 314
Query: 421 tttctactctgcaggagagtgacaacaacacacagtcctcccagccaacccaagcttcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tttctactctgcaggagagtgacaacaacacacagtcctcccagccaacccaagcttcct 254
Query: 481 tgactgtgtatctcccacttcaccacctgagagaaacggcaccatgaggagag 533
||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 253 tgactgtatatctcccacttcaccacctgagaggaacggcaccatgaggagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
