Query= MSMg01no388_e06.b1 MSMg01no388_e06.b1 CHROMAT_FILE:
MSMg01no388_e06.b1 PHD_FILE: MSMg01no388_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:34 2005
(501 letters)
>mm_chr19_10272116_10273017
Length = 902
Score = 835 bits (432), Expect = 0.0
Identities = 444/448 (99%), Gaps = 1/448 (0%)
Strand = Plus / Minus
Query: 55 catgaagaagtaggttctaataccagaaaagggatgtctcagcaagaggatgcctgggca 114
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 902 catgaagaagtaggttctaataccagagaagggatgtctcagcaagaggatgcctgggca 843
Query: 115 agaagcaaaagtctccatgtccttttgtgtgggctgccactagaaggggtagcccagagt 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 agaagcaaaagtctccatgtccttttgtgtgggctgccactagaaggggtagcccagagt 783
Query: 175 tagggtgagttttctacctccacacagactgggccagctgctcgggttctggttgcttcc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tagggtgagttttctacctccacacagactgggccagctgctcgggttctggttgcttcc 723
Query: 235 agacgtggtcaagttgataagccattataactagtaaagcttagtggggg-gccagcctg 293
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 722 agacatggtcaagttgataagccattataactagtaaagcttagtgggggagccagcctg 663
Query: 294 tgagctctgatctcacaattgtgctattaacagcacataattaacttgaaaaggccttga 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgagctctgatctcacaattgtgctattaacagcacataattaacttgaaaaggccttga 603
Query: 354 caacagattgagtagaagactaatagcatgggccttcaagtcctttaaattccactatac 413
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 caacagcttgagtagaagactaatagcatgggccttcaagtcctttaaattccactatac 543
Query: 414 ggtgggggcaggtgagcgtgtggaggtcaaagggcagctttcagggatcttttacctgcc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggtgggggcaggtgagcgtgtggaggtcaaagggcagctttcagggatcttttacctgcc 483
Query: 474 atgcctttgcacaatgatttttaatttc 501
||||||||||||||||||||||||||||
Sbjct: 482 atgcctttgcacaatgatttttaatttc 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 902
Length adjustment: 10
Effective length of query: 491
Effective length of database: 892
Effective search space: 437972
Effective search space used: 437972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_e06.g1 MSMg01no388_e06.g1 CHROMAT_FILE:
MSMg01no388_e06.g1 PHD_FILE: MSMg01no388_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:34 2005
(511 letters)
>mm_chr19_10104252_10105162
Length = 911
Score = 965 bits (499), Expect = 0.0
Identities = 508/511 (99%)
Strand = Plus / Plus
Query: 1 tttggtgcaaagggcagacaggacctcttctttgcctggactctgctccctgcatggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggtgcaaagggcagacaggacctcttctttgcctggactctgctccctgcatggctg 260
Query: 61 ctgagggcaggcctgatggtccactgaggcctcctgcatctccctgctcttctctccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgagggcaggcctgatggtccactgaggcctcctgcatctccctgctcttctctccatc 320
Query: 121 agctctgctttctctggtgtgctcaccctcatccctgactgcccccacttggctcccctc 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 agctctgctttctctggtgtgctcactctcatccctgactgcccccacttggctcccctc 380
Query: 181 tcctctaggtggatacgacactgtttgcagagttccaagcttggagagcttcacctaccc 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctctaggtggatacgacgctgtttgcagagttccaagcttggagagcttcacctaccc 440
Query: 241 tggataagagctgccccttcctcgaaagggtgtaccgggaggacgtgggcccttgccttg 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggataagagctgccccttcctagaaagggtgtaccgggaggacgtgggcccttgccttg 500
Query: 301 acttcacagtgcaggaggtgaggtgggctgacagtggttagctggggatccagcccagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acttcacagtgcaggaggtgaggtgggctgacagtggttagctggggatccagcccagta 560
Query: 361 gttccctgtcacccagcatctcaatgctcttccctgatttgtcacagctctcagctctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttccctgtcacccagcatctcaatgctcttccctgatttgtcacagctctcagctctgg 620
Query: 421 ttcggactgctgtggaggacaacacactcaccattgagcctgtggcttcacagacactgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcggactgctgtggaggacaacacactcaccattgagcctgtggcttcacagacactgc 680
Query: 481 ccgctgtgaaggtgcccactgttgagtgtaa 511
|||||||||||||||||||||||||||||||
Sbjct: 681 ccgctgtgaaggtgcccactgttgagtgtaa 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
