Query= MSMg01no391_p19.b1 MSMg01no391_p19.b1 CHROMAT_FILE:
MSMg01no391_p19.b1 PHD_FILE: MSMg01no391_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:22 2005
(341 letters)
>mm_chr19_58571066_58571808
Length = 743
Score = 578 bits (299), Expect = e-169
Identities = 329/341 (96%), Gaps = 6/341 (1%)
Strand = Plus / Plus
Query: 1 agtgaaccccagatacctacccatgtctacctcttcaggacagggtttgcaggcatgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 agtgaaccccagatacctacccatgtctacctcttcaggacagggtttgcaggcatgact 264
Query: 61 tggagctctttttaaaatgtaagttctaaagacttaactaaggtctttatgcttgcaagg 120
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 tggggctctttttaaaatgtaagttccaaagacttaactaaggtctttatgcttgcaagg 324
Query: 121 caagcagtttgccaactgagccacccctccccccgccccagcttctctttttgaatcttt 180
||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 325 caagcagtttgccaactgagccacc---cccccc-ccccagcttctctttctgaatcttt 380
Query: 181 aagcacagggaagtcatactgtttataatcacgatttattcattctctggctacttctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagcacagggaagtcatactgtttataatcacgatttattcattctctggctacttctcc 440
Query: 241 tcatgtatattagcaacagttattgcttccgcggaaaacagaatctacagtttggactta 300
||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 441 tcatgtagattagcaacagttattgcttctggggaaaacagaatctacagtttggactta 500
Query: 301 attttctgcctagaatttcat--gttactgttggatactta 339
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 attttctgcctagaatttcatatgttactgttggatactta 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 743
Length adjustment: 9
Effective length of query: 332
Effective length of database: 734
Effective search space: 243688
Effective search space used: 243688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_p19.g1 MSMg01no391_p19.g1 CHROMAT_FILE:
MSMg01no391_p19.g1 PHD_FILE: MSMg01no391_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:22 2005
(250 letters)
>mm_chr19_58691385_58692035
Length = 651
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 1 tcctacattaggcatatggcttaggtttagacaaaatggtttggtgccttatagtgaact 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 449 tcctacattaggcatatggcttaggcttagacaaaatggtttggtgccttatagtgaact 390
Query: 61 actaa-ttttttttttaaagcagtggcttcttagtaaaagggaatatcctggagtctaaa 119
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 actaatttttttttttaaagcagtggcttcttagtaaaagggaatatcctggagtctaaa 330
Query: 120 actcacccagaggcttgctgtgaatgattgatgtgcttttaatctggtggcgcaggaaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 actcacccagaggcttgctgtgaatgattgatgtgcttttaatctggtggcgcaggaaag 270
Query: 180 ggtatgccatcttccaatgacagcttatgataaatgtgctttctctgaattaatccttta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggtatgccatcttccaatgacagcttatgataaatgtgctttctctgaattaatccttta 210
Query: 240 tagaatttc 248
|||||||||
Sbjct: 209 tagaatttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 651
Length adjustment: 9
Effective length of query: 241
Effective length of database: 642
Effective search space: 154722
Effective search space used: 154722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
