TCCTTTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCACTCACTCTCCATATATGCCAAACCGGCCTTGAACCC
ACACAGGAGATCTGCCTGCCTCTGCCTCCTGAGTGCTTGATTGGATTAAA
AGTGTGTACTACCATGCTCAGCAATGCATTTTTATTTTATTTGTATGGGT
GTTTTGCCTGCATGTATGCATGCCAGTACACAAAGTGCATTCAGTGCCCA
CAGAGGCTAGAGAGGGCAGAAGATACCCAGGAACTGGAGTCACAAATGGT
TGGGAGCAATGAAGTGGGTGTGGAGAGTCAAATCCCCCTCCTCTGGAAGA
GCGGCCACTGTTCTTAAGTACTGAGCCATCTTTCCAGCTCCACGTTTAAT
TTTTGGATGTATGTGTGTTATTAAGGGATAAACATTTTCTTAGAACATTG
TGTACTAAATGGGTGCCCAACCTCACTTTGCTAATTCAAAAGTCTTGAGT
TATTTACGAGTCTTAGAGGCCAGGATGCCTAACACCTGGGCCAAACAAAG
GCCCATCTGATCGAGTTTGGGGTTTTTGTGCGTGCATGTTCGCATTTTTG
CCTCCCACCCCCACCTATCCCTGTCCCTCGTTATGCTCGCTCCCCCCTCC
CTCTACTCCTACACATATACTACTTTTTCTCCCTTCTCCCCCCTTATCCT
CCTCCCCCTTCAATATTCGTTTCCTATTTCCCTCTCCCCTCCCTACCTCC
TCCCATTTTTCCCCTCCACCC

NNNNTTCGAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGTCTTATCTGCAAATG
TTTTGATTCTGAGAATATATCGAATTGCATTCATAATGTTTGACTCATGG
CTCACACAACCAAAAAGCATGGACCAGAGGCATACTGCTTTCATTTCTGA
TGGTGTTGATGGGGTGATGAAGGCTGACAAGCAAGAGCTCTTGCCACTTG
CCCGTGAGCTAGCTGTCTGTCAGTATCCACCTGCACTACAGAAAGGAGTT
CTCCTTTCAAACTTGATTGTTACTCTCAGGGAACATGACACCTATGACAG
AGAACCAGCAGTTTTTGAATTTAATTTAGCTCTTCCTGGTTTGACAGTAA
CACAGAACTGGCGTTTTCACGAGTATCTGGGATCCTTCACCTTGGACAGA
CTGGATTGCTCTCTTCAACTGGAGTTGAAAACTCCAGTACAGGAGGGAAA
AAGTTTCACCATGAAGGAAGGTGAAAATCAGAGTAACGTTTTTGAAGGAA
TAGCGAAATCTGTTGTCTGGATCGATCGCCATCACCCACCCCTCCGCTCT
CTCATATTTTAACCTTCATTTTGTTCTGCTTTACTTCTCATCATTTCCTA
ACCCCCTCTATACTGGCCTTGATGGTGTTTTGCGACGCCGAATCAGGGGA
AACCTCACAAGGCACGTTTGTAAAATCCTGTAGACCCCGGAATCCTTCCT
TACTT

Query= MSMg01no394_f03.b1 MSMg01no394_f03.b1 CHROMAT_FILE:
MSMg01no394_f03.b1 PHD_FILE: MSMg01no394_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:40 2005
         (452 letters)



>mm_chr19_17516943_17517794
          Length = 852

 Score =  557 bits (288), Expect = e-163
 Identities = 306/312 (98%)
 Strand = Plus / Minus

                                                                       
Query: 141 tatgggtgttttgcctgcatgtatgcatgccagtacacaaagtgcattcagtgcccacag 200
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 tatgggtgttttgcctgcgtgtatgcatgccagtacacaaagtgcattcagtgcccacag 793

                                                                       
Query: 201 aggctagagagggcagaagatacccaggaactggagtcacaaatggttgggagcaatgaa 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 aggctagagagggcagaagatacccaggaactggagtcacaaatggttgggagcaatgaa 733

                                                                       
Query: 261 gtgggtgtggagagtcaaatccccctcctctggaagagcggccactgttcttaagtactg 320
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 732 gtgggtgcggagagtcaaatccccctcctctagaagagcggccactgttcttaagtactg 673

                                                                       
Query: 321 agccatctttccagctccacgtttaatttttggatgtatgtgtgttattaagggataaac 380
           |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agccatctttccagttccatgtttaatttttggatgtatgtgtgttattaagggataaac 613

                                                                       
Query: 381 attttcttagaacattgtgtactaaatgggtgcccaacctcactttgctaattcaaaagt 440
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 612 attttcttagaacattgtgtactaaatggttgcccaacctcactttgctaattcaaaagt 553

                       
Query: 441 cttgagttattt 452
           ||||||||||||
Sbjct: 552 cttgagttattt 541


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space:   372164
Effective search space used:   372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no394_f03.g1 MSMg01no394_f03.g1 CHROMAT_FILE:
MSMg01no394_f03.g1 PHD_FILE: MSMg01no394_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:40 2005
         (472 letters)



>mm_chr19_17363921_17364792
          Length = 872

 Score =  835 bits (432), Expect = 0.0
 Identities = 462/472 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagtcttatctgcaaatgttttgattctgagaatatatcgaattgcattcataatgtttg 60
           |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 201 cagtcttatctgcaaatgttttgattctgagaatatctcgaattgcattcataacgtttg 260

                                                                       
Query: 61  actcatggctcacacaaccaaaaagcatggaccagaggcatactgctttcatttctgatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actcatggctcacacaaccaaaaagcatggaccagaggcatactgctttcatttctgatg 320

                                                                       
Query: 121 gtgttgatggggtgatgaaggctgacaagcaagagctcttgccacttgcccgtgagctag 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 gtgttgatggggtgatgaaggctgacaagcaagagcgcttgccacttgcccgtgagctag 380

                                                                       
Query: 181 ctgtctgtcagtatccacctgcactacagaaaggagttctcctttcaaacttgattgtta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtctgtcagtatccacctgcactacagaaaggagttctcctttcaaacttgattgtta 440

                                                                       
Query: 241 ctctcagggaacatgacacctatgacagagaaccagcagtttttgaatttaatttagctc 300
           ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 441 ctctcagggaacatgacacctatgacagagaaccagcagttttcgattttaatttagctc 500

                                                                       
Query: 301 ttcctggtttgacagtaacacagaactggcgttttcacgagtatctgggatccttcacct 360
           ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||
Sbjct: 501 ttcctggtttgacagtaacacagaattggtgttttcatgagtatctgggatccttcacct 560

                                                                       
Query: 361 tggacagactggattgctctcttcaactggagttgaaaactccagtacaggagggaaaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggacagactggattgctctcttcaactggagttgaaaactccagtacaggagggaaaaa 620

                                                               
Query: 421 gtttcaccatgaaggaaggtgaaaatcagagtaacgtttttgaaggaatagc 472
           | ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 ggttcaccatgaaggaaggtgaaaatcagagcaacgtttttgaaggaatagc 672


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space:   398244
Effective search space used:   398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)