NNTTTCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGN
GNGGAATTCATTAATTTTCCAGGCAAGTGGATGAAACTTCAAAATATCAT
CCTGAGTGAGGTAACTCAGTAACCAAAGAACACACATGGTATTTATTCAA
TGGTAAGTGGATATTATCCAAAAAGTTTGGAATACCCAAGATTCAATACA
CAGACCTTAGGAAGCCCACGAAGAAGGAAGACCAAAGGATGGGTGCTTCA
GTGCTTCTAAGAAAGGGGAACAAAATTCTCACAGGAGGAAATATGGAGAC
AAAGTGTAGAGCAGAGAATGAAGGATAGACCATCCAGAGACTACCCCACC
TAGGAATCCAGTCACCAAACCTGGACACTATTGTGGATGCCAAGAAGTGT
ATGCTAACAGGAGCCTGATATGGCTGTTTCCTGAGAGGCTCTGCCAGATC
CTGAAAAATACAGTGTGATGCTCACAAGCAACCATTGGACTGAGCACAGG
GTTCCTGATGGAGGAGTTGGAGAAGGGATTGAAGGAGCTGAGAGGCTTTG
CAGCCCCATGGGGTAAGCAACAGTGTCAACAGGGCAGAACCTCTGGAGCT
CTCAGGGACTGGAACAGCAACTAAGGAGTACACATGGAGGGACCCATGGC
TCTGGCTGCCTATTTGGCAGGGGCTGGCCTTGTTGGACATCAGTGTGAGG
AGCGGCTCTTGTGTCTGAGTATTTCGATGCCCCAGTGTAAGGG

NNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTCCCGAGAAAATCTGAGATATTTGCCATATAC
TTATTACACACAAATACACGCATATGAAATTTTAAGTAAGTGGAAAAATA
TGTTCCCTATGATTTTTTCAATCCTCCCTACTGTCACATATTTCACCTCC
CACATTTTCTTTTAGTGTGATCTGTTTTCTTCCCTCCCCAGATAACATCT
CTTCTTTCCACTTTATATCTTTCATAGCTCCTGTGTTCTACCAAGCTTCT
CTCTAGTGCTCACCTCTCCATCATGGTTATTCTTCCCATTCTTGGCTTTC
TGCAATTACTCCAAATCATATACTAGTATCTAATCATTCAGAGGTGTGAT
TGACAAATAAGGAGCAACATTTCAATTTCTGCCCTGGGTCTGAATTATCT
TCCTCAGTATATTATTTTCTAGCATGACCCATTTACCAGCAAATTTCATT
TTAATATATATATATTAATATATACTAAAATTTAAAATATAAATTTATAT
TATACACACACACACACACACATATATAAAACCATATTTTCATTTCCATT
CATTAACTGAAGGACATTTGTGTTGTTTCCATTTTCTAATTATTGTCAAT
AGAGTGGCAATGAGCATGGCAGAGCAAATATCTGTGAGATAGGATACGGA
TTCTGTGACACAGACCAAGATATAGTTCTTCATTCTTATGGGAAATTATT

Query= MSMg01no401_f08.g1 MSMg01no401_f08.g1 CHROMAT_FILE:
MSMg01no401_f08.g1 PHD_FILE: MSMg01no401_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:56 2005
         (536 letters)



>mm_chr19_19718854_19719789
          Length = 936

 Score =  766 bits (396), Expect = 0.0
 Identities = 411/416 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgagatatttgccatatacttattacacacaaatacacgcatatgaaattttaagtaa 60
           ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 416 tctgagatatttgccatatacttattatacacaaatacacgcatacgaaattttaagtaa 357

                                                                       
Query: 61  gtggaaaaatatgttccctatgattttttcaatcctccctactgtcacatatttcacctc 120
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gtggaaaaacatgttccctatgattttttcaatcctccctactgtcacatatttcacctc 297

                                                                       
Query: 121 ccacattttcttttagtgtgatctgttttcttccctccccagataacatctcttctttcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ccacattttcttttagtgtgatctgttttcttccctccccagataacatctcttctttcc 237

                                                                       
Query: 181 actttatatctttcatagctcctgtgttctaccaagcttctctctagtgctcacctctcc 240
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 actttatatttttcatagctcctgtgttctaccaagcttctctctagtgctcacctctcc 177

                                                                       
Query: 241 atcatggttattcttcccattcttggctttctgcaattactccaaatcatatactagtat 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 atcatggttactcttcccattcttggctttctgcaattactccaaatcatatactagtat 117

                                                                       
Query: 301 ctaatcattcagaggtgtgattgacaaataaggagcaacatttcaatttctgccctgggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ctaatcattcagaggtgtgattgacaaataaggagcaacatttcaatttctgccctgggt 57

                                                                   
Query: 361 ctgaattatcttcctcagtatattattttctagcatgacccatttaccagcaaatt 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56  ctgaattatcttcctcagtatattattttctagcatgacccatttaccagcaaatt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space:   487076
Effective search space used:   487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)