Query= MSMg01no404_g08.b1 MSMg01no404_g08.b1 CHROMAT_FILE:
MSMg01no404_g08.b1 PHD_FILE: MSMg01no404_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:03 2005
(249 letters)
>mm_chr19_20679730_20680381
Length = 652
Score = 410 bits (212), Expect = e-119
Identities = 241/256 (94%), Gaps = 11/256 (4%)
Strand = Plus / Plus
Query: 1 tcattttggcttttatttgcccgttcctgaatcctggaggatggtgagtgaactaactgt 60
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 201 tcattttggcttttatttgccccttcctgaatcctggaggatggtgagtg----aactgt 256
Query: 61 tctggatgcttctctcaggccataggaagatattggacattagttttgagagaaaggaga 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tctggatgcttctctcagaccataggaagatattggacattagttttgagagaaaggaga 316
Query: 121 gaataaggagggcagacacaattttgttcactagactgaaaaaaaaa------gaaatta 174
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 317 gaataaggagggcagacacaattttgttcactagactgaaaaaaaaaatatgagaaatta 376
Query: 175 tattcttaatggatttataaggcag-aaacaagcagctagaatacattaaacagaaaatt 233
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 377 cattcttaatggatttataaggcagcaaacaagcacctagaatacattaaacagaaaatt 436
Query: 234 ctgaaacatgcttaca 249
||||||||||||||||
Sbjct: 437 ctgaaacatgcttaca 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 652
Length adjustment: 9
Effective length of query: 240
Effective length of database: 643
Effective search space: 154320
Effective search space used: 154320
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no404_g08.g1 MSMg01no404_g08.g1 CHROMAT_FILE:
MSMg01no404_g08.g1 PHD_FILE: MSMg01no404_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:03 2005
(250 letters)
>mm_chr19_20857133_20857781
Length = 649
Score = 476 bits (246), Expect = e-139
Identities = 249/250 (99%), Gaps = 1/250 (0%)
Strand = Plus / Minus
Query: 1 attctggatccaaagatgtcctgcatagcttttcactgggctgatcatacagctagaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 attctggatccaaagatgtcctgcatagcttttcactgggctgatcatacagctagaggt 390
Query: 61 taggtctatattgtttctatggccaaagcaagggaacaaaaaatagactgtaaattatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 taggtctatattgtttctatggccaaagcaagggaacaaaaaatagactgtaaattatct 330
Query: 121 actttctgagtagaataaaaaaaaacctttgagaaatatacttaaaataactttaattat 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 329 actttctgagtagaataaaaaaaaa-ctttgagaaatatacttaaaataactttaattat 271
Query: 181 ctggagagatttacaatcctggaaaaataaactgcactttaacatactctttgaatgatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ctggagagatttacaatcctggaaaaataaactgcactttaacatactctttgaatgatt 211
Query: 241 tcctttgctc 250
||||||||||
Sbjct: 210 tcctttgctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 649
Length adjustment: 9
Effective length of query: 241
Effective length of database: 640
Effective search space: 154240
Effective search space used: 154240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
