Query= MSMg01no416_e02.b1 MSMg01no416_e02.b1 CHROMAT_FILE:
MSMg01no416_e02.b1 PHD_FILE: MSMg01no416_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:50 2005
(604 letters)
>mm_chr19_45683978_45684981
Length = 1004
Score = 1087 bits (562), Expect = 0.0
Identities = 586/594 (98%), Gaps = 2/594 (0%)
Strand = Plus / Minus
Query: 12 gaattccaggatagtcc-gggctacatggagaaactctgtcttgaaatagcaaaaacaaa 70
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 gaattccaggacag-ccagggctacatggagaaactctgtcttgaaatagcaaaaacaaa 821
Query: 71 gcaaaacaaaacaaaaaccaaaaaccataacatagccagtaaggaagctgaggctagtga 130
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 gcaaaacaaaccaaaaaccaaaaaccataacatagccagtaaggaagctgaggctagtga 761
Query: 131 gcagttgctgtttcagcggtcatggccacagatgcgcaagtctgagcactggctttgggt 190
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 760 gcagttgctgtttcagcggtcatggccacagatgtgcaagtctgagcactggctttgggt 701
Query: 191 ccagaggtcatgctgttcgctgcggtcctacactgctcatggtcctgtctcatgctgaac 250
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ccagaggtgatgctgttcgctgcggtcctacactgctcatggtcctgtctcatgctgaac 641
Query: 251 actttcagttgggattagaactctttgactgtcttgaaattattttcaattttaaacaat 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 actttcagttgggattagaactctttgactgtcttgaaattattttcaattttaaacaat 581
Query: 311 gaatcttgacttgcttctttgacctgagcaagcctatttgaattttattttctgggaccc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gaatcttgacttgcttctttgacctgagcaagcctatttgaattttattttctgggaccc 521
Query: 371 tttagcccggctcgacaaactcagactgtacctgcttaaaaaggaagctccccctcccgt 430
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tttagcccggctcggcaaactcagactgtacctgcttaaaaaggaagctccccctcccgt 461
Query: 431 gtctgcctgtgtccagctcagaaactcctggacaggggctgtgggagacatgggctccag 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gtctgcctgtgtccagctcagaaactcctggacaggggctgtgggagacatgggctccag 401
Query: 491 agcagagtcctctgccgccccaggtaactgagggcgtccattccaggcagatcacaagga 550
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 agcagagtcctctgccgtcccaggtaactgagggcgtccattccaggcagatcacaagga 341
Query: 551 gtagcgagaagaatggaaggctggcccggtttcaggtcttcatggacctgccgg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtagcgagaagaatggaaggctggcccggtttcaggtcttcatggacctgccgg 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_e02.g1 MSMg01no416_e02.g1 CHROMAT_FILE:
MSMg01no416_e02.g1 PHD_FILE: MSMg01no416_e02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:50 2005
(466 letters)
>mm_chr19_45521650_45522516
Length = 867
Score = 880 bits (455), Expect = 0.0
Identities = 464/467 (99%), Gaps = 1/467 (0%)
Strand = Plus / Plus
Query: 1 tcctatccaaggcttccattaacccccactgacagctccaaacaggattaagaatttgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctatccaaggcttccattaacccccactgacagctccaaacaggattaagaatttgga 260
Query: 61 agcataaaaaatagttgttctttgcaaatacacacaatccctttgcattttgagaaaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcataaaaaatagttgttctttgcaaatacacacaatccctttgcattttgagaaaggc 320
Query: 121 tgcatctgtagtattcttataattagcgtcagacaatgtagcagggggatcaacctactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 tgcatctgtagtattcttataattagcgtcagacaatgtagcagggggatcaacccactt 380
Query: 181 ggcaggatttt-gacttctgtcctagggaggaaggcagtgcggatggcagttagtactct 239
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcaggttttttgacttctgtcctagggaggaaggcagtgcggatggcagttagtactct 440
Query: 240 ttggttttttcccagggagcactttccattctatctggttcctaccactatgtttggatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttggttttttcccagggagcactttccattctatctggttcctaccactatgtttggatc 500
Query: 300 tgtgcaccgctgaaaaatagccccccttgaaagcttggactggggttccatagaagttaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgcaccgctgaaaaatagccccccttgaaagcttggactggggttccatagaagttaa 560
Query: 360 acactgtgtgcagactttgtttgatgttgctgtggtgtaatagagtgtgccaaatggtga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acactgtgtgcagactttgtttgatgttgctgtggtgtaatagagtgtgccaaatggtga 620
Query: 420 acttgccagagaagctattgtctgtggaagcatgccagagaggatta 466
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acttgccagagaagctattgtctgtggaagcatgccagagaggatta 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 867
Length adjustment: 10
Effective length of query: 456
Effective length of database: 857
Effective search space: 390792
Effective search space used: 390792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
