Query= MSMg01no425_b02.b1 MSMg01no425_b02.b1 CHROMAT_FILE:
MSMg01no425_b02.b1 PHD_FILE: MSMg01no425_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:11 2005
(399 letters)
>mm_chr19_26051841_26052638
Length = 798
Score = 677 bits (350), Expect = 0.0
Identities = 382/394 (96%), Gaps = 4/394 (1%)
Strand = Plus / Minus
Query: 6 cttggccaccctgaaagtagtaagtagaagtgtttctttcactgaactctgtacattttt 65
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 cttggccaccctgaaagtagtaagtagacgtgtttctttcactgaactctgtacattttt 381
Query: 66 tgggtatgattttttttctccatcccaattctcagttcatatactaaagaagaatgggaa 125
|||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 380 ggggtatga-tttttttctccatcccaattctcaattcatatactaaagaagaatgggaa 322
Query: 126 aaattaatactggacagacaacagtgggatctatctcagggcagaaatgaaatgcagtct 185
||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||
Sbjct: 321 aaattaatactggacagacaacagtaggatctatctcaaggaagaaatgaaatgcagtct 262
Query: 186 caggcaacagacatatttctgttaagtaatggttaagaagaaggatgcaggtggtggtgg 245
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 caggcaacagacatatttctgttaagtaatggttaagaagaaggatgca---ggtggtgg 205
Query: 246 tggtgcacgcctttaatcccagcactcgggaggcagaggcaggcggatttctgagttcga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tggtgcacgcctttaatcccagcactcgggaggcagaggcaggcggatttctgagttcga 145
Query: 306 ggccagcccagtctacaaagtgagttccaggacagccagggctatacagagaaaacctgt 365
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ggccagcctagtctacaaagtgagttccaggacagccagggctatacagagaaaacctgt 85
Query: 366 ctcaaaaaagaagaaggaggaggaggaagaggag 399
||||||||||||||||||||||||||| ||||||
Sbjct: 84 ctcaaaaaagaagaaggaggaggaggaggaggag 51
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 798
Length adjustment: 9
Effective length of query: 390
Effective length of database: 789
Effective search space: 307710
Effective search space used: 307710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_b02.g1 MSMg01no425_b02.g1 CHROMAT_FILE:
MSMg01no425_b02.g1 PHD_FILE: MSMg01no425_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:11 2005
(445 letters)
>mm_chr19_25877557_25878401
Length = 845
Score = 830 bits (429), Expect = 0.0
Identities = 441/445 (99%)
Strand = Plus / Plus
Query: 1 tcctttctctagctatcagcccatcctgcttcctcactgttcctaagctctgcttctgtc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctttctctggctatcagcccatcctgcttcctcactgttcctaagctctgcttctgtc 260
Query: 61 tcattggaaatgggtgtgaagtcagtcttcccatctgaaccccaaagaaaaggcaggcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcattggaaatgggtgtgaagtcagtcttcccatctgaaccccaaagaaaaggcaggcag 320
Query: 121 agccgtgctttctgtgtttgggaggctccatccattctgactgcctgtttcctgattgtg 180
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccttgcttactgtgtttgggaggctccatccattctgactgcctgtttcctgattgtg 380
Query: 181 gttaacccttgtgtgtgtgatgcgcagggaaagcaaagggcattctgtggggctctaaga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 gttaacccttgtgtgtgtgatgcgcagggaaagcaaagggcattctgtggggctctgaga 440
Query: 241 gcatgtgcctgccagctcgggaagttcccaagggagaaggggcagggacaacagtgcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcatgtgcctgccagctcgggaagttcccaagggagaaggggcagggacaacagtgcaag 500
Query: 301 tgactcctttaccccccaaggagttagcaggtgagtcaacaaaacctgggatcagtgata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgactcctttaccccccaaggagttagcaggtgagtcaacaaaacctgggatcagtgata 560
Query: 361 ccagaagttgttgattgccctgggccacctaaagtagaggcaaacatactacataaattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccagaagttgttgattgccctgggccacctaaagtagaggcaaacatactacataaattt 620
Query: 421 taagccctatttctttttctaggta 445
|||||||||||||||||||||||||
Sbjct: 621 taagccctatttctttttctaggta 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
