AATTAGTCTCATGTCANNNNNCGNANNCCTTTTCAAAAGGACCGNGGAAN
CCAAGCTGACTTCATCCACCGCCGAGAANGGGGGAAAAAAAAAGGTTCTT
AGTTGTTGTGTTAAATCTCCTCCCAAATGTGCCCCAGCGATGAAAACACA
ACACAGTTCATATGATTACCTGCTGTGCGCCTGGATGGGGCAGATCTACC
GCTACATTACCATCTTCCACAGCTTATGAGACCCCTTAGAACTTGTTTCT
CCAGGCCATGTGCTTCTGCTCTGCTTTTCTCCTTCTTCCTCCTCCTCTGC
CTCCTCTCCTTTTTTTTTTTTCTGTTCGTCTTCCTTCCTTCTGCTCCACC
TTCCCTTTTACCTGCCCAATCATCAGCTCTCCTTTATTCTACAAATTAAG
GTGGGAAACAGGTTTACAGGAAATCACCTGAGAGCTGACTCACTCCTTGT
TCACACTCACAGGAGAATGGAATTAACATCACCTATAATTAGCCCCAGGG
ATATCCACAACACTTAGTAATCCTTCTTTCAAAGGAGCCACCATGCTGAT
GTGCAACTGTTCATTATCACGGCTGATATCATTGCAGAATAAAACTGCTC
AAGCAATACTGCTGAACTCGATCTTCCACCAACTGGTGAGACTCCTTACT
AACCTTAGGTGTACCACTCCCAAAGACAGCGTGAATAATGACTCCCGAAC
GTGTTCTATTTGGGATGGCACCTATTTATTTGACC

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCCAGATGGGACAGTCTTTGGATGGC
CTTTACTTCAGTCTCTGCTCTGCATTTTCTATCCCTATTTGCTCCTGTGA
GTATTTTGTTCCCCTTTCTAAGAAGGACCAAAGCACCCACACTTTGGTCT
TCCTTCTTCTTGAGGCTCATGTGGCCTGTGAATTGGATCTTGTAGAAATG
GAAGGAAAGATGAAGATCTGCAATAAAACTGCTTCCTGGACAAAATGACC
AGGATCTTCCCTGGAGTATCTACTGGAGTTGGGGACTAGAATATTGTAAT
GATAGGGGATGGAAGTTAAGAGGTAATGATCTCTGTGCTCTACTGAATAT
GGAGAGGGGGTAGGAAGGTACACTTGTTTATGTCGTTTGTTGCTTTCTTA
TTTACGAGATCTGATCTTTATACTCTTTACCTATCTTCGTATACGCCAAA
TTATGTATTTACTTTCTTTACTTTCTCGTTCTATATTTATAATCCCCTTT
CCCTATCACCCCTTCTCCCCTCTGTCCATTTCTTCTGACGTCTTCTGACT
TTAATCTCTAATCCACTTCTTTCTTTTCTTTCAACCATACTCCCAATTTC
GTTTTTTTTTCCTTTACTTCCTCTCACTCCTATCCCTTCCTTCTTCCCTC
CTTTTTTCCTTATTTATCTCTCCTTTATCCTCTTTTTACCTTTTTCCCTT
CTCCTTTCCTCTTTC

Query= MSMg01no428_l14.b1 MSMg01no428_l14.b1 CHROMAT_FILE:
MSMg01no428_l14.b1 PHD_FILE: MSMg01no428_l14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:59 2005
         (517 letters)



>mm_chr19_51444076_51444991
          Length = 916

 Score =  938 bits (485), Expect = 0.0
 Identities = 509/517 (98%), Gaps = 1/517 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcctcccaaatgtgccccagcgatgaaaacacaacacagttcatatgattacctgctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcctcccaaatgtgccccagcgatgaaaacacaacacagttcatatgattacctgctgt 260

                                                                       
Query: 61  gcgcctggatggggcagatctaccgctacattaccatcttccacagcttatgagacccct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgcctggatggggcagatctaccgctacattaccatcttccacagcttatgagacccct 320

                                                                       
Query: 121 tagaacttgtttctccaggccatgtgcttctgctctgcttttctccttcttcctcctcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagaacttgtttctccaggccatgtgcttctgctctgcttttctccttcttcctcctcct 380

                                                                       
Query: 181 ctgcctcctctccttttttttttttctgttcgtcttccttccttctgctccaccttccct 240
           ||||||||||||| | ||   |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgcctcctctccctcttccattttctgttcgtcttccttccttctgctccaccttccct 440

                                                                       
Query: 241 tttacctgcccaatcatcagctctcctttattctacaaattaaggtgggaaacaggttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttacctgcccaatcatcagctctcctttattctacaaattaaggtgggaaacaggttta 500

                                                                       
Query: 301 caggaaatcacctgagagctgactcactccttgttcacactcacaggagaatggaattaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caggaaatcacctgagagctgactcactccttgttcacactcacaggagaatggaattaa 560

                                                                       
Query: 361 catcacctataattagccccagggatatccacaacacttagtaatccttctttcaaagga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catcacctataattagccccagggatatccacaacacttagtaatccttctttcaaagga 620

                                                                       
Query: 421 gccaccatgctgatgtgcaactgttcattatcacggctgatatcattgcagaataaaact 480
           ||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 621 gccaccatgctgatgtgcaactgttcattatcaggg-tgatatcactgcagaataaaact 679

                                                
Query: 481 gctcaagcaatactgctgaactcgatcttccaccaac 517
           |||||||||||||||||||||||||||||||||||||
Sbjct: 680 gctcaagcaatactgctgaactcgatcttccaccaac 716


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 916
Length adjustment: 10
Effective length of query: 507
Effective length of database: 906
Effective search space:   459342
Effective search space used:   459342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)