CGCCCTGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCTAATATTTCCATCAAGAAATGTACTCTCTCATTCATT
TCCTAACACTGAGCAAATAACCATAGCTCAGTGAAGTACTACTTACTAGG
CACTGTACTGAAAGCTGATGTATTTGCAGAACAGAGTAACCCCATGCTCT
AAAACACATATTTTTGTCTTCTTGAATCACATATGTTATGATGCAGAAAC
AAGTGCTGGAAATAATGAAACTAGGAGGGGAGTCAGGAGTGAGGGGAGGA
GGATGAAGAAGCAGAAGAGGGTTTTTTATTTCTTTCTCAACCCGAACACA
AAGTCCTATTATTCTCTTGTTGGCCTCCGAATTAACAAGCGCCTTTATAT
CTCTCAACGTTCATATTAATCTTGAATACACTTTACTTCATATGCAGCCG
CTCAGCTCAGTATCTTTACATATCTTCCTTCCTCCTCTTCCGCCTGTAGA
ACTTCTTGTATTACCCCTACCTTTCTATGCAGTGTCTACTAATTTTGAAT
TCTATTTTTGTTCCCTTTCACTTGTTATTTCTGAGTCGTCCTTTATTTCC
TTAAACCATCCACCCTTCTTTTCCCTCACTTTTCCCACTTCTTAACCCTT
TTTCTATCCTTTTTTTCTCTTTTTATTCATTCTTCTTCTTTCTTTTTTCC
TCTTTTCTTCATCTTCCCGCCACATTTTCTCTCCCCTTCTTTTTTTTTT

NNNGGCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCCTGTTTTAATGCTTAAC
CTGGAATTTTGTGATATTGGTCTTACAGTATGTGTTGGTCCATTGTAAGC
AGCTAAACAGACAGACATAATCTGCTCTCTTAAGGAGTTCCTGGAAGAAA
CTGTCATTCACTCTTCCCCCTTGTTCTTCTGGCTCTTGTATTCATAACTA
ATACAGGCTGAAATGGCAAACCATCCCGGGAGAGAGTTATGTTCTGTGAA
TTTAGATTTGAAATTTAATATTTTTAGACTCTGTTAATGCATTTTATATA
ATTCTGCCTGTTCTTTCATTATTCTCCTATGTATTTACAGATGTGTAGAT
GCCTAAGGGGAGCTTCAGGGATGTCCCAGATGTGGTTACAAGGGTATGTT
ACATTGTGATATTCATTAGGCTATTAAGGATTTGTAAAACAAAATACAGA
CATTTAAGATTACAGAACAAATTCCTACCCAAGTAGAAAAGAGAACAATG
AGACTGAGGATACAACCCACACCATCGGAGCACAACAATCTTATTTTCTG
ATAGGCCTGACTGCTTATTTCAGATGACATGTACCTCTATCCTCTATTTA
CCCAAGTAGGAATTCTCTGAGCACTCTCAGATCACACTAAAAGGGATATG
CACATGTGGCCCCCAACTTCCAN

Query= MSMg01no436_m12.b1 MSMg01no436_m12.b1 CHROMAT_FILE:
MSMg01no436_m12.b1 PHD_FILE: MSMg01no436_m12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:57 2005
         (239 letters)



>mm_chr19_19170925_19171563
          Length = 639

 Score =  447 bits (231), Expect = e-130
 Identities = 237/239 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caagaaatgtactctctcattcatttcctaacactgagcaaataaccatagctcagtgaa 60
           |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caagaaatttgctctctcattcatttcctaacactgagcaaataaccatagctcagtgaa 380

                                                                       
Query: 61  gtactacttactaggcactgtactgaaagctgatgtatttgcagaacagagtaaccccat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtactacttactaggcactgtactgaaagctgatgtatttgcagaacagagtaaccccat 320

                                                                       
Query: 121 gctctaaaacacatatttttgtcttcttgaatcacatatgttatgatgcagaaacaagtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gctctaaaacacatatttttgtcttcttgaatcacatatgttatgatgcagaaacaagtg 260

                                                                      
Query: 181 ctggaaataatgaaactaggaggggagtcaggagtgaggggaggaggatgaagaagcag 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctggaaataatgaaactaggaggggagtcaggagtgaggggaggaggatgaagaagcag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space:   144900
Effective search space used:   144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no436_m12.g1 MSMg01no436_m12.g1 CHROMAT_FILE:
MSMg01no436_m12.g1 PHD_FILE: MSMg01no436_m12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:57 2005
         (448 letters)



>mm_chr19_19019045_19019892
          Length = 848

 Score =  812 bits (420), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   attttgtgatattggtcttacagtatgtgttggtccattgtaagcagctaaacagacaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttgtgatattggtcttacagtatgtgttggtccattgtaagcagctaaacagacaga 260

                                                                       
Query: 61  cataatctgctctcttaaggagttcctggaagaaactgtcattcactcttcccccttgtt 120
           |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 261 cataatctgctctcttaaggagttcctggaagaaactgccatgcactcttcccccttgtt 320

                                                                       
Query: 121 cttctggctcttgtattcataactaatacaggctgaaatggcaaaccatcccgggagaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttctggctcttgtattcataactaatacaggctgaaatggcaaaccatcccgggagaga 380

                                                                       
Query: 181 gttatgttctgtgaatttagatttgaaatttaatatttttagactctgttaatgcatttt 240
           ||||||||||||||||||||||||||||||||| |||   ||||||||||||||||||||
Sbjct: 381 gttatgttctgtgaatttagatttgaaatttaaaattgggagactctgttaatgcatttt 440

                                                                       
Query: 241 atataattctgcctgttctttcattattctcctatgtatttacagatgtgtagatgccta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atataattctgcctgttctttcattattctcctatgtatttacagatgtgtagatgccta 500

                                                                       
Query: 301 aggggagcttcagggatgtcccagatgtggttacaagggtatgttacattgtgatattca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggggagcttcagggatgtcccagatgtggttacaagggtatgttacattgtgatattca 560

                                                                       
Query: 361 ttaggctattaaggatttgtaaaacaaaatacagacatttaagattacagaacaaattcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaggctattaaggatttgtaaaacaaaatacagacatttaagattacagaacaaattcc 620

                                       
Query: 421 tacccaagtagaaaagagaacaatgaga 448
           |||||||||||||||||||||| |||||
Sbjct: 621 tacccaagtagaaaagagaacagtgaga 648


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space:   367044
Effective search space used:   367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)