Query= MSMg01no437_d21.b1 MSMg01no437_d21.b1 CHROMAT_FILE:
MSMg01no437_d21.b1 PHD_FILE: MSMg01no437_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:33 2005
(156 letters)
>mm_chr19_20998229_20998784
Length = 556
Score = 265 bits (137), Expect = 9e-76
Identities = 146/149 (97%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 6 aattaatgctcattagcatacattaggaaatgttaatcagcatcatccagagaaggaaaa 65
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 206 aattaatgctcattagcatacattagcaaatgttaatcagcatcatccagagaaggaaaa 265
Query: 66 ggagtggtggcagggaaagtcagtaaggagcagagtagttcagaaaggattgcaactgaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggagtggtggcagggaaagtcagtaaggagcagagtagttcagaaaggattgcaactgaa 325
Query: 126 atac-agatgggggagggaggggaggagg 153
| || ||||||||||||||||||||||||
Sbjct: 326 a-accagatgggggagggaggggaggagg 353
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 556
Length adjustment: 8
Effective length of query: 148
Effective length of database: 548
Effective search space: 81104
Effective search space used: 81104
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no437_d21.g1 MSMg01no437_d21.g1 CHROMAT_FILE:
MSMg01no437_d21.g1 PHD_FILE: MSMg01no437_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:33 2005
(545 letters)
>mm_chr19_21034237_21035180
Length = 944
Score = 801 bits (414), Expect = 0.0
Identities = 450/462 (97%), Gaps = 1/462 (0%)
Strand = Plus / Minus
Query: 74 ctttctggtgactcagctgatcattttgaattatccttagaccttgtaagtgatccatgg 133
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 944 ctttctggtgactcagctgatcattttgaattatccttagtccttgtaagtgatccatgg 885
Query: 134 cccatcctcctgttagaaatgccaataaggtctcattggttcatcattctaaacattagt 193
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 884 cccgtcctcctgttagaaatgccaataaggtctaattggttcatcattctaaacattagt 825
Query: 194 gtagttattatttgggtcttttcatgtattccttttcatgagtgaataaacatgtgttgt 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 gtagttattatttgggtcttttcatgtattccttttcatgagtgaataaacatgtgttgt 765
Query: 254 gcttctccacaaaaagtctgccacacaatacttggcacataacctggaagaaaatttggg 313
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 764 gcttctccacaaaaagtctgccacacaatacttggcacataacctggaagaaaatt-ggg 706
Query: 314 gaaagacgtcaggattattatgatgtgcatggaccaggtaaagtacctgtaggtaccttt 373
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 705 gaaagacgtcaggattattatgatgtgcatggaccaggtaaagtacctgtagataccttt 646
Query: 374 agtctttggtccttgattagggataggagagagaaataggtttcagaaaaggaaagcaaa 433
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 645 agtctttggtccttgattagggataggagagagaaataggtttcagaaacggaaagcaaa 586
Query: 434 actaagcagtcccagacctggtcatggtacactgctcaatcctgctcctcccttcttggg 493
|||||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||
Sbjct: 585 actaagcagtcccagagctggtcgtggtacactgctcacttctgctcctcccttcttggg 526
Query: 494 cagcagaggaagcaacaacatgtctgcggtggacagcatgag 535
|||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 525 cagcagaggaagcagcaacatgtctgccgtggacagcatgag 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 944
Length adjustment: 10
Effective length of query: 535
Effective length of database: 934
Effective search space: 499690
Effective search space used: 499690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
