Query= MSMg01no440_e04.b1 MSMg01no440_e04.b1 CHROMAT_FILE:
MSMg01no440_e04.b1 PHD_FILE: MSMg01no440_e04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:39 2005
(511 letters)
>mm_chr19_58927301_58928212
Length = 912
Score = 936 bits (484), Expect = 0.0
Identities = 505/512 (98%), Gaps = 1/512 (0%)
Strand = Plus / Minus
Query: 1 gccctgcccacagctctgagctctagacctgggtttttgtaggctggcctcagccttgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gccctgcccacagctctgagctctagacctgggtttttgtaggctggcctcagccttgac 653
Query: 61 ggggacctaagagctgagaaagtcctttggcacagcagcctccccaagacacacccatcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agggacctaagagctgagaaagtcctttggcacagcagcctccccaagacacacccatcc 593
Query: 121 gagaaaccctgagttgtccacacaccgggtcttgtttttgctgctcttatcttttccacg 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gggaaaccctgagttgtccacacaccgggtcttgtttttgctgctcttatcttttccacg 533
Query: 181 tccgtgtgtctggctttgctggcatggctctaaacatgattctctaacagcaatctgaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tccgtgtgtctggctttgctggcatggctctaaacatgattctctaacagcaatctgaca 473
Query: 241 gcaagggttgtcagtagcaagggttactaactgcaacccttttacgttcaaatgaaactg 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 472 gcaagggttgtcagtagcaagggttactaactgcaaccctttcacgttcaaatgaaactg 413
Query: 301 tccccgttgggaaggtgaatcgtctgcctgtatcctcatctttgccctctctgggtgtgc 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tccccgttgggaaggtgaatcatctgcctgtatcctcatctttgccctctctgggtgtgc 353
Query: 361 cgaggcaagcaggagggttggctaaaatcccactct-gtgggttcagacgggtttgacct 419
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 352 cgaggcaagcaggagggttggctaaaaccccactcttgtgggttcagacgggtttgacct 293
Query: 420 cgaggtttaatttactgcttctgggtgatatgagagggtgtttataaagggcttggcata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cgaggtttaatttactgcttctgggtgatatgagagggtgtttataaagggcttggcata 233
Query: 480 agcctgttctacagaggctggccaaaaagtag 511
|||||||||||||||||||| |||||||||||
Sbjct: 232 agcctgttctacagaggctgcccaaaaagtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 912
Length adjustment: 10
Effective length of query: 501
Effective length of database: 902
Effective search space: 451902
Effective search space used: 451902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_e04.g1 MSMg01no440_e04.g1 CHROMAT_FILE:
MSMg01no440_e04.g1 PHD_FILE: MSMg01no440_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:39 2005
(548 letters)
>mm_chr19_58766403_58767351
Length = 949
Score = 899 bits (465), Expect = 0.0
Identities = 489/497 (98%), Gaps = 3/497 (0%)
Strand = Plus / Plus
Query: 53 atgactacatgtggacatctgaagtgtgttgaaagaaaacacacactagagagactatta 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atgactacatgtggacatctgaagtgtgttgaaagaaaacacacactagagagactatta 314
Query: 113 ctgtgtgcatgtggaggagcccaagagtgtaaaagtaagctcctgaacttgatccccatg 172
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 315 ctgtatgcatgtggaggagcccaagagtgtaaa-gtaagctcctgaacttgatccccatg 373
Query: 173 atcaaatcagctaaaatcaaacctgtcaaagaatgagccaggcacggaatctatacattt 232
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 374 atcaaatcagctaaaatcaaacctgtcaaagaatgagccaggcacagaatctatacattt 433
Query: 233 taaccatgcagaaaattatgtccatccccttctctgagagcgtgggcccccctccaggta 292
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 taaccatgcagaaaattaggtccatccccttctctgagagcgtgggcccccctccaggta 493
Query: 293 cacatccccaccaccaccaccccatcaagtctctgacagattaggtgcatactctcccat 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cacatccccaccaccaccaccccatcaagtctctgacagattaggtgcatactctcccat 553
Query: 353 ggagacagacaaggcagcccagttggggaacagatactacaatcaggtgatagctatagg 412
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gg-gacagacaaggcagcccagttggggaacagatactacaatcaggtgatagctatagg 612
Query: 413 gatagccccctctccagtttgaacagtagaattaggatgctgttaacattagccacaagg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gatagccccctctccagtttgaacagtagaattaggatgctgttaacattagccacaagg 672
Query: 473 tgccctaaaaa-tcccttagaccatgtgaagatctaggcgttgcaagattgatgccacag 531
||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 673 tgccctaaaaaatcccttagactatgtgaagatctaggcgttgctagattgatgccacag 732
Query: 532 aggcttattgggtttct 548
|||||||||||||||||
Sbjct: 733 aggcttattgggtttct 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 949
Length adjustment: 10
Effective length of query: 538
Effective length of database: 939
Effective search space: 505182
Effective search space used: 505182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
