MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-444C21
Chromosome	19 (Build37)
Map Location	35,258,196 - 35,258,671
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Stambpl1, Acta2, Fas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik, Ifit1, Slc16a12, LOC676714, Pank1, Mphosph1, LOC383464
Downstream gene	LOC100042292, A830019P07Rik, Htr7, Rpp30, Ankrd1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Stambpl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76630 MGI:1923880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acta2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11475 MGI:87909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fas (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14102 MGI:95484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ch25h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12642 MGI:1333869
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lipa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16889 MGI:96789
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ifit2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15958 MGI:99449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ifit3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15959 MGI:1101055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	OTTMUSG00000016644 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667373 MGI:3650685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 52 ESTs, 9 Proteins

name	LOC667370 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667370
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 42 ESTs, 10 Proteins

name	2010002M12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:112419 MGI:2148249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ifit1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15957 MGI:99450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc16a12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240638 MGI:2147716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC676714 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676714
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Pank1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75735 MGI:1922985
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mphosph1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240641 MGI:2444576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383464 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs pseudo : _no_value

name	LOC100042292 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	A830019P07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329056 MGI:3028035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Htr7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15566 MGI:99841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpp30 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54364 MGI:1859683
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankrd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107765 MGI:1097717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stambpl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130651 GeneID:76630 MGI:1923880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Stam binding protein like 1 transcript_id : NM_029682.4

name	Acta2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982518 GeneID:11475 MGI:87909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin, alpha 2, smooth muscle, aorta transcript_id : NM_007392.2

name	Fas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679750 GeneID:14102 MGI:95484
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fas (TNF receptor superfamily member) transcript_id : NM_007987.1

name	Ch25h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6857768 GeneID:12642 MGI:1333869
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholesterol 25-hydroxylase transcript_id : NM_009890.1

name	Lipa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098109 GeneID:16889 MGI:96789
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysosomal acid lipase A transcript_id : NM_021460.2

name	Ifit2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982841 GeneID:15958 MGI:99449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interferon-induced protein with tetratricopeptide repeats 2 transcript_id : NM_008332.2

name	Ifit3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754287 GeneID:15959 MGI:1101055
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interferon-induced protein with tetratricopeptide repeats 3 transcript_id : NM_010501.1

name	OTTMUSG00000016644 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94405891 GeneID:667373 MGI:3650685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 46 ESTs, 9 Proteins product : predicted gene, OTTMUSG00000016644, transcript variant 2 transcript_id : XM_001000889.1

name	OTTMUSG00000016644 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94405889 GeneID:667373 MGI:3650685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 46 ESTs, 9 Proteins product : predicted gene, OTTMUSG00000016644, transcript variant 1 transcript_id : XM_001000875.1

name	LOC667370 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94405885 GeneID:667370
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 42 ESTs, 10 Proteins product : similar to interferon-induced protein with tetratricopeptide repeats 3, transcript variant 2 transcript_id : XM_001000862.1

name	2010002M12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801872 GeneID:112419 MGI:2148249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010002M12 gene transcript_id : NM_053217.2

name	Ifit1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110626103 GeneID:15957 MGI:99450
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interferon-induced protein with tetratricopeptide repeats 1 transcript_id : NM_008331.2

name	Slc16a12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802325 GeneID:240638 MGI:2147716
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 16 (monocarboxylic acid transporters), member 12 transcript_id : NM_172838.2

name	Pank1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963828 GeneID:75735 MGI:1922985
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pantothenate kinase 1 transcript_id : NM_023792.1

name	Mphosph1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133505570 GeneID:240641 MGI:2444576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : M-phase phosphoprotein 1 transcript_id : NM_183046.1

name	LOC100042292 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270438 GeneID:100042292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to CG10953-PA transcript_id : XM_001477894.1

name	Htr7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865997 GeneID:15566 MGI:99841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 7 transcript_id : NM_008315.2

name	Rpp30 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476124 GeneID:54364 MGI:1859683
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribonuclease P/MRP 30 subunit (human) transcript_id : NM_019428.2

name	Ankrd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893293 GeneID:107765 MGI:1097717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 1 (cardiac muscle) transcript_id : NM_013468.3

name	Stambpl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55742879 CCDS:CCDS29756.1 GeneID:76630 MGI:1923880
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : AMSH-family protein protein_id : NP_083958.3

name	Acta2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671507 CCDS:CCDS29757.1 GeneID:11475 MGI:87909
definition	GO_component : GO:0005884 - actin filament [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : actin, alpha, vascular smooth muscle product : actin, alpha 2, smooth muscle, aorta protein_id : NP_031418.1

name	Fas (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679751 CCDS:CCDS29758.1 GeneID:14102 MGI:95484
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0006924 - activated T cell apoptosis [Evidence IDA]; GO:0006915 - apoptosis [Evidence IGI]; GO:0006955 - immune response [Evidence IEA]; GO:0008625 - induction of apoptosis via death domain receptors [Evidence IMP] [Evidence IGI] [Evidence IDA]; GO:0006925 - inflammatory cell apoptosis [Evidence IMP] [Evidence IDA]; GO:0045060 - negative thymic T cell selection [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006927 - transformed cell apoptosis [Evidence IDA] codon_start : 1 exception : mismatches in translation note : Fas antigen; lymphoproliferation; tumor necrosis factor receptor superfamily, member 6 product : Fas (TNF receptor superfamily member) protein_id : NP_032013.1

name	Ch25h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6857769 CCDS:CCDS29759.1 GeneID:12642 MGI:1333869
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0008395 - steroid hydroxylase activity [Evidence IDA] GO_process : GO:0008203 - cholesterol metabolism [Evidence IDA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA]; GO:0016126 - sterol biosynthesis [Evidence IEA] codon_start : 1 product : cholesterol 25-hydroxylase protein_id : NP_034020.1

name	Lipa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098110 CCDS:CCDS29760.1 GeneID:16889 MGI:96789
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0016789 - carboxylic ester hydrolase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004771 - sterol esterase activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : lysosomal acid lipase 1 protein_id : NP_067435.2

name	Ifit2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680363 CCDS:CCDS29761.1 GeneID:15958 MGI:99449
definition	GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 product : interferon-induced protein with tetratricopeptide repeats 2 protein_id : NP_032358.1

name	Ifit3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754288 CCDS:CCDS29762.1 GeneID:15959 MGI:1101055
definition	GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 product : interferon-induced protein with tetratricopeptide repeats 3 protein_id : NP_034631.1

name	OTTMUSG00000016644 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94405892 GeneID:667373 MGI:3650685
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001000889.1

name	OTTMUSG00000016644 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94405890 GeneID:667373 MGI:3650685
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001000875.1

name	LOC667370 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94405886 GeneID:667370
definition	codon_start : 1 product : similar to interferon-induced protein with tetratricopeptide repeats 3 isoform 2 protein_id : XP_001000862.1

name	2010002M12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74315955 CCDS:CCDS29765.1 GeneID:112419 MGI:2148249
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC112419 protein_id : NP_444447.1

name	Ifit1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626104 CCDS:CCDS29766.1 GeneID:15957 MGI:99450
definition	GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 product : interferon-induced protein with tetratricopeptide repeats 1 protein_id : NP_032357.2

name	Slc16a12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370260 CCDS:CCDS29767.1 GeneID:240638 MGI:2147716
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 16 (monocarboxylic acid transporters), member 12 protein_id : NP_766426.1

name	Pank1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963829 GeneID:75735 MGI:1922985
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004594 - pantothenate kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0015937 - coenzyme A biosynthesis [Evidence TAS] codon_start : 1 product : pantothenate kinase 1 beta protein_id : NP_076281.1

name	Mphosph1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133505571 GeneID:240641 MGI:2444576
definition	GO_component : GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 product : M-phase phosphoprotein 1 protein_id : NP_898867.1

name	LOC100042292 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270439 GeneID:100042292
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477944.1

name	Htr7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865998 CCDS:CCDS29769.1 GeneID:15566 MGI:99841
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004977 - melanocortin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : 5-hydroxytryptamine (serotonin) receptor 7 protein_id : NP_032341.2

name	Rpp30 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42476125 CCDS:CCDS29770.1 GeneID:54364 MGI:1859683
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0004526 - ribonuclease P activity [Evidence IEA] GO_process : GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 exception : mismatches in translation note : RNaseP protein p30; ribonuclease P2 product : ribonuclease P/MRP 30kDa subunit protein_id : NP_062301.2

name	Ankrd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560506 CCDS:CCDS29771.1 GeneID:107765 MGI:1097717
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003714 - transcription corepressor activity [Evidence IDA] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 note : ankyrin-like repeat protein; cardiac responsive adriamycin protein product : ankyrin repeat domain 1 (cardiac muscle) protein_id : NP_038496.2

name	LOC676714 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676714
definition	number : 1 pseudo : _no_value

name	LOC676714 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676714
definition	number : 2 pseudo : _no_value

name	LOC676714 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676714
definition	number : 3 pseudo : _no_value

name	LOC676714 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676714
definition	number : 4 pseudo : _no_value

name	LOC676714 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676714
definition	number : 5 pseudo : _no_value

name	LOC383464 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270517 GeneID:383464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to proteasome (prosome, macropain) subunit, alpha type 5 pseudo : _no_value transcript_id : XR_034183.1

name	A830019P07Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149270518 GeneID:329056 MGI:3028035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA A830019P07 gene transcript_id : XR_035408.1

clone name	MSMg01-163J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452O20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-464I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382A19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-430O02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-045P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511M24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-100L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332A20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-140D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475D17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-475B19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-307L15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-122P24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-122L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072J20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-505K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184B14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-444C21.T7 (MSMg01no444_c21.b1)	MSMg01-444C21.TJ (MSMg01no444_c21.g1)
ACC	AG533409	AG533410
length	734	850
length of high quality (start - end)	469 (76 - 544)	---
definition	CHROMAT_FILE: MSMg01no444_c21.b1 PHD_FILE: MSMg01no444_c21.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:12:00 2005	CHROMAT_FILE: MSMg01no444_c21.g1 PHD_FILE: MSMg01no444_c21.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:12:00 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NCCCTCTATAAXXXXXXXXXXXXXXXXXXXXXXATAGTTTCAAAATCCGC GGAATTCTCTGTGTATTTCAGGATAGCCTCTCAAAAAGAGTGTCAATCTT CTTCCCTCAGCTAAGTGCTGTTATATCCAGTGTGCACCACTACACTTGGT CTTCTGTGTTGTTGAAGCATATCTCCTCCTACTGTCCTTTCTTTTGACAT AGTGTTTCACAATGGAAGTGAGGCTGGCTTGAACTTATCAAATAGCCCAT GTTAGCTTCTAAAACTAGTAACAATCCTATCTCCACTTCTAAGTCCTGGA TTGTAGATATTGAGAATTCCTGATTTTTCTCTGGGTTTTAGGATCTGAAC TCCAGCCACCTTGATTGCATAGTAAATTACTTAATGCAGAGCTGTTTCCC ACACCCCACTTCCTGTAATTTTGACAAGCCAGTTTAGCCCTCCTTAAGAA TTTAAAAGCCCTATTTATAATAGGCAGAAGCTGGAAAGAACCCAGATGTC CCTCAACAGAGGAATGAATACAGAAAATGTGGTACATCTACACAATGGAG TACTACTCTGCTATTATCATCAATGAATTTATGAAATTCTTGGACAAATC TGGAGGATATCATCCTGAGTGAGGTTAACTAATTTTCAAAGAAGTCTCTT GATATGCACTCCTCGATAAGAGGGTATTATTCCACAAATCTATAAAACCC TAGATAATACTTCCCCAATAACAGAAAATTCCTA	CCCCAACCTCGTTGCCCGGCGTTGCCGGGTTCCCCAATGGGGTGGCCGCG ATCTTCCTACCTTTCTCTCGCTCTCCTATCCCTATTTCCCACACCTACGC GGTGTGTCTTTTTAATTTTCATACTATAACAAGCGGTCAGTCGCCCCCTC CTTCTATCTATTTAATCTTGGCCCCTTTTTATTGACCTGGGTTGAAAGGA CACAACAACGCGATCAACAAGGATGAATCCACGCTGCCGCCATATGCAAA CCCATCAACATATCTAACAGAATAAAGTATTGGCTTACGGGGCCGACAGG CTATTTTTTGTTGCGTAATGCAGCCGATAACGAAAAGGAGACCAAGAGAA GACCGCCCCCAACAACCATTTACCACCACAACTATACGACAACCAACGAT CCCAACCCACCGCCTCACGTAGGATCGACGGAGATCCAGAAAAAAACATA ACCCGCCGCACCCCACGTAACTCGTATGCTGCCCCCAATACGCATCGAAA AAATTTACCATAGCCATCTGCCCGTCGGAGGCGTGTCTGGGAGCGGTTAC GTGAATCGGTGGTGTCAAATGCTTTACTACAAACCCCCCTTTTGTTGTTT GTCGGTGTAGGTGGCGGACTAGATGCTTCTTGTCCACCCCCAACCCCACT TATATTACCGTCTCGGATAAATCGTTCGGAAATCCCTTTTTACCAACCAC TTATCCCCCACCCCTAAAGTAAGCTGCGTATTCGACCGCCGCCGATAATC GCATCATACACTACTACACTCCATCGCAGAGGTTCGCATATATTGTGAGA TAAGTATAACGTTCCAGCGCTCGCACTATATTATATCACCCCGCACCCTT
quality values	Open. Hide. 0 3 7 6 6 10 13 8 8 8 8 8 21 18 37 37 32 26 29 35 23 18 10 10 10 19 19 39 33 21 19 8 8 8 17 9 9 6 7 7 6 6 6 8 9 10 9 9 16 18 12 22 23 31 31 31 30 50 47 47 44 27 19 7 7 6 8 8 9 7 6 8 8 8 8 12 24 33 37 37 37 37 44 53 57 59 59 57 57 57 53 53 53 53 47 47 47 57 53 53 53 53 53 53 57 38 36 36 36 36 36 50 50 50 50 59 27 27 17 15 9 10 13 14 20 19 37 34 37 48 48 59 50 57 57 57 57 57 57 57 57 57 57 57 57 53 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 50 57 48 48 48 59 59 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 68 57 44 42 33 33 33 42 44 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 57 57 57 59 59 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 47 41 44 34 37 27 25 12 10 10 14 16 15 28 32 35 35 31 27 59 48 48 48 59 59 59 59 57 57 57 57 57 57 59 59 59 59 57 57 57 57 57 57 59 68 68 68 68 68 68 50 43 40 32 30 21 24 23 28 44 44 57 57 57 57 57 59 68 59 57 54 54 44 48 48 57 57 57 59 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 57 57 59 59 59 48 48 48 59 59 59 68 68 68 48 48 42 42 42 48 48 46 46 46 48 43 43 31 31 20 28 32 39 47 48 57 34 39 35 35 35 39 39 41 39 37 30 30 30 30 27 25 37 41 41 41 59 37 37 30 30 21 28 19 25 25 36 28 30 30 30 28 28 24 21 28 28 28 28 30 26 29 27 23 28 23 18 22 22 21 30 33 37 30 25 13 12 12 13 15 21 29 32 35 31 30 39 37 37 39 30 30 23 23 20 24 22 18 18 20 18 17 18 22 24 37 37 37 37 34 20 19 11 11 11 11 11 20 18 12 10 10 11 11 21 15 28 23 15 13 10 10 10 19 22 22 10 6 6 6 6 6 8 8 10 11 11 11 9 12 10 8 10 10 20 16 12 8 8 8 10 10 13 8 8 12 14 14 14 17 21 24 30 22 28 30 25 25 26 28 24 16 12 10 14 13 13 17 17 13 11 11 11 13 13 17 12 9 9 8 8 8 8 8 8 8 8 9 9 10 17 12 26 16 17 10 10 10 10 9 13 16 17 15 15 15 13 17 10 10 10 10 10 8 8 8 8 7 7 9 9 9 9 9 9 9 9 11 6 6 6 6 8 6 8 8 11 10 8 10 8 8 8 8 6 6 8 8 12 12 8 8 8 8 8 8 11 8 8 8 8 8 10 10 8 8 8 8 10 10 8 8 8 10 9 9 9 10 10 9 9 9 10 10 10 9	Open. Hide. 8 8 8 8 8 8 8 10 10 9 9 9 9 9 10 12 15 18 19 15 12 10 8 8 8 8 8 10 10 8 8 8 8 9 9 9 12 10 11 11 11 13 11 11 11 8 8 6 6 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 9 9 9 9 10 10 11 9 9 9 9 11 13 10 8 8 8 8 8 9 10 10 10 8 8 8 8 15 10 10 6 6 8 10 12 9 8 10 8 8 6 6 8 8 9 9 10 10 9 8 8 8 8 10 10 11 10 8 8 7 7 7 8 8 8 9 8 8 6 6 8 8 10 10 10 10 8 8 8 8 8 8 8 8 10 15 12 12 12 12 12 10 10 10 11 11 10 11 8 8 6 6 8 8 8 8 8 8 6 6 8 8 9 9 8 8 8 8 8 8 10 8 8 8 6 6 8 8 8 8 8 8 8 8 6 6 6 8 8 9 9 8 8 8 8 8 8 7 7 8 8 8 8 10 10 6 6 8 8 12 12 11 8 8 6 6 8 10 8 8 8 8 12 12 11 9 9 8 8 8 8 8 8 8 6 6 7 6 8 8 6 6 8 8 6 6 8 8 6 7 8 8 8 8 10 11 11 11 9 8 8 8 8 8 8 8 9 9 9 10 10 10 10 10 11 13 11 11 11 11 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 10 10 11 10 10 10 10 10 11 12 12 11 10 10 10 8 8 8 8 8 8 8 8 9 10 10 10 10 7 8 8 8 8 8 8 8 8 12 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 11 9 9 11 12 12 10 8 6 6 6 8 8 8 8 8 10 8 9 9 9 8 8 6 7 8 8 10 10 11 11 11 11 12 10 10 10 10 12 10 13 10 13 10 8 8 8 8 8 8 10 10 12 10 9 10 8 8 8 8 8 8 10 9 8 10 10 8 8 8 8 6 6 8 10 8 8 8 8 8 8 8 8 8 8 10 9 9 8 8 8 8 8 8 13 10 16 12 11 12 9 12 8 10 6 7 11 10 10 7 7 8 8 9 9 8 8 8 8 8 8 9 8 8 8 8 8 8 8 9 9 9 7 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 9 9 9 10 12 12 11 8 8 7 7 8 8 9 9 10 10 10 10 10 10 8 8 8 8 8 8 15 17 14 13 14 12 12 9 9 9 11 11 12 12 12 10 10 9 9 9 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 10 6 6 8 8 8 8 8 8 8 8 8 7 10 8 8 8 8 8 8 10 8 11 8 8 10 8 8 8 8 10 10 10 10 10 10 10 8 8 6 6 8 8 8 8 8 8 10 12 10 8 8 8 8 8 8 6 6 10 11 10 9 9 9 9 9 10 11 11 8 8 8 8 8 8 8 7 7 6 8 8 11 10 13 12 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 11 11 10 10 9 9 9 9 11 10 10 9 9 9 9 12 10 8 8 8 8 8 8 11 10 8 10 8 8 8 10 11 9 9 9 12 10 10 8 10 8 8 9 12 11 10 8 8 8 8 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 6 6 8 10 9 10 11 10 6 8 6 6 8 8 8 13 10 10 8 8 8 8 8 13 10 10 8 8 8 6 6 8 8 8 6 6 8 6 6 10 8 9 8 8 7 7 9 10 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no444_c21.b1 MSMg01no444_c21.b1 CHROMAT_FILE:
MSMg01no444_c21.b1 PHD_FILE: MSMg01no444_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:00 2005
         (469 letters)



>mm_chr19_35257996_35258872
          Length = 877

 Score =  779 bits (403), Expect = 0.0
 Identities = 456/477 (95%), Gaps = 9/477 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcctctcaaaaagagtgtcaatcttcttccctcagctaagtgctgttatatccagtgtgc 60
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 201 gcctctcaaaaagagtgtcaatcttcttccctcagctaagtgctgggatatccagtgtgc 260

                                                                       
Query: 61  accactacacttggtcttctgtgttgttgaagcatatctcctcctactgtc---ctttct 117
           ||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||
Sbjct: 261 accactacatttggtcttctgtgttgttgaagcatatctcctcctactgtccttctttct 320

                                                                       
Query: 118 tttgacatagtgtttcacaatggaagtgaggctggcttgaacttatcaaatagcccatgt 177
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgacatagtgtttcataatggaagtgaggctggcttgaacttatcaaatagcccatgt 380

                                                                       
Query: 178 tagcttctaaaactagtaacaatcctatctccacttctaagtcctggattgtagatattg 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcttctaaaactagtaacaatcctatctccacttctaagtcctggattgtagatattg 440

                                                                       
Query: 238 agaattcctgatttttctctgggttttaggatctgaactccagccaccttgattgcatag 297
           |||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaattcctgacatttctatgggttttaggatctgaactccagccaccttgattgcatag 500

                                                                       
Query: 298 taaattacttaatgcagagctgtttcccacaccc-c----acttcctgtaattttgacaa 352
           |||||  ||||||||||||||||||||||||||| |    |||||||| |||||||||||
Sbjct: 501 taaatgccttaatgcagagctgtttcccacacccacttctacttcctgcaattttgacaa 560

                                                                       
Query: 353 gccagtttagccctccttaagaatttaaaagccctatttataataggcagaagctggaaa 412
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 gccagtttagccctccttaagaatttaaaagccctatttataatagccagaagctggaaa 620

                                                                    
Query: 413 gaacccagatgtccctcaacagaggaatgaatacagaaaatgtggtacatctacaca 469
           |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 gaacccagatgtccctca-cagaggaatgaatacagaaaatgtggtacatttacaca 676


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 877
Length adjustment: 10
Effective length of query: 459
Effective length of database: 867
Effective search space:   397953
Effective search space used:   397953
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information