Query= MSMg01no445_c23.b1 MSMg01no445_c23.b1 CHROMAT_FILE:
MSMg01no445_c23.b1 PHD_FILE: MSMg01no445_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:18 2005
(222 letters)
>mm_chr19_14702180_14702801
Length = 622
Score = 391 bits (202), Expect = e-113
Identities = 217/222 (97%)
Strand = Plus / Minus
Query: 1 tagaaggcatataagatcatgtagaaaggttacaaggagatgagctttccagaagaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tagaaggcatataagatcatgtagaaaggttacaaggagatgagctttccagaagaataa 363
Query: 61 aaaacttaatatcatcgaagtgacttccaacaatgaaaatgaaggggagtctggcatgtg 120
||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 362 aaaacctaatatcagcgaagtgacttccaacaatgaaaatgaaggggagtctgacatgtg 303
Query: 121 ctaattaaggagtttgagatgtgtgaatttgtttccaattatgagatctgagtccaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctaattaaggagtttgagatgtgtgaatttgtttccaattatgagatctgagtccaataa 243
Query: 181 tgaattctttgaacttgtttccagagtaaaatatttggtccc 222
|||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 242 tgaattctttgaacctgtttccagagtaacatatttggtccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no445_c23.g1 MSMg01no445_c23.g1 CHROMAT_FILE:
MSMg01no445_c23.g1 PHD_FILE: MSMg01no445_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:18 2005
(422 letters)
>mm_chr19_14540266_14541087
Length = 822
Score = 754 bits (390), Expect = 0.0
Identities = 417/432 (96%), Gaps = 10/432 (2%)
Strand = Plus / Plus
Query: 1 aaaaggtcactgaaaaacacatggtttttaaaagatgaaaataagtggtgaagagaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aaaaggtcactgaaaaacacatggtttttaaaagatgaaaataagtggtgaagagaaaag 250
Query: 61 gggatttacgacacacaaatgcaaccaac----------gccctatacagccctatacag 110
||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 251 gggatttacgacacacaaatgcaaccaacgccctatacagccctatacagccctatacag 310
Query: 111 gaggcggcgtagggagagatgcagattgctggcaagttcagtcaggcattcgtgttgagt 170
||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 311 gagacggcgtagggaaagatgcagcttgctggcaaattcagtcaggcattcgtgttgagt 370
Query: 171 ccaagcagcctcgtattagtgagagagtacttaggcagaagcaaaactattgcagctgtg 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ccaagcagcctcgtattagtgagagagtacttaggcagaagcaaaactattgcagctgtg 430
Query: 231 tctagcgtggcaattcaaatgaagcacctaataaaatgacagctaaactcctgagcgagt 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tctagcgtggcaattcaaatgaagcacctaataaaatgacagctaaactcctgagcgagt 490
Query: 291 tcaccacaaaccacaggcaatgagagcatcacactaactcttatctgtacttttcaactt 350
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 491 tcaccacaaaccacaggcaatgagaacatcacactaactcttatctgtacttttcaactt 550
Query: 351 tactatgatgtttttctctcattttcatccacctatgtctctcttaagcatacaaactca 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tactatgatgtttttctctcattttcatccacctatgtctctcttaagcatacaaactca 610
Query: 411 ggaagcaaatac 422
||||||||||||
Sbjct: 611 ggaagcaaatac 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
