MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-447M03
Chromosome	19 (Build37)
Map Location	58,477,502 - 58,477,945
singlet/doublet	singlet
Overlap gene	Gfra1
Upstream gene	Trub1, LOC100043038, Atrnl1
Downstream gene	LOC100043503, 1700011F14Rik, Pnlip, Pnliprp1, Pnliprp2, 1700019N19Rik, Hspa12a, 6430537H07Rik, 4930506M07Rik, LOC668626, Vax1, LOC668627, Kcnk18, Slc18a2, Pdzd8, LOC100034727, LOC100043073
Link	Open Mouse BAC browser

Click to get alignment info.

name	Trub1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72133 MGI:1919383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043038 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Atrnl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226255 MGI:2147749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gfra1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14585 MGI:1100842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043503 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins pseudo : _no_value

name	1700011F14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75645 MGI:1922895
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pnlip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69060 MGI:97722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pnliprp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18946 MGI:97723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pnliprp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18947 MGI:1336202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700019N19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67507 MGI:1914757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspa12a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73442 MGI:1920692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6430537H07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226265 MGI:2441717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930506M07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71653 MGI:1918903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668626 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 985 ESTs, 2 Proteins pseudo : _no_value

name	Vax1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22326 MGI:1277163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668627 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Kcnk18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:332396 MGI:2685627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc18a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214084 MGI:106677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdzd8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107368 MGI:2677270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100034727 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100034727
definition	note : ribosomal protein S12 pseudogene pseudo : _no_value

name	LOC100043073 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Trub1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754011 GeneID:72133 MGI:1919383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TruB pseudouridine (psi) synthase homolog 1 (E. coli) transcript_id : NM_028115.2

name	Trub1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353903 GeneID:72133 MGI:1919383
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TruB pseudouridine (psi) synthase homolog 1 (E. coli) transcript_id : NM_029839.2

name	LOC100043038 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270527 GeneID:100043038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Sm protein G transcript_id : XM_001479390.1

name	Atrnl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56699441 GeneID:226255 MGI:2147749
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : attractin like 1 transcript_id : NM_181415.3

name	Gfra1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328183 GeneID:14585 MGI:1100842
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glial cell line derived neurotrophic factor family receptor alpha 1 transcript_id : NM_010279.2

name	1700011F14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205447 GeneID:75645 MGI:1922895
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700011F14 gene transcript_id : NM_029372.2

name	Pnlip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476138 GeneID:69060 MGI:97722
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pancreatic lipase transcript_id : NM_026925.3

name	Pnliprp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803252 GeneID:18946 MGI:97723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pancreatic lipase related protein 1 transcript_id : NM_018874.2

name	Pnliprp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755117 GeneID:18947 MGI:1336202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pancreatic lipase-related protein 2 transcript_id : NM_011128.1

name	1700019N19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372226 GeneID:67507 MGI:1914757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700019N19 gene transcript_id : NM_026208.2

name	Hspa12a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388274 GeneID:73442 MGI:1920692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 12A transcript_id : NM_175199.3

name	6430537H07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802690 GeneID:226265 MGI:2441717
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6430537H07 gene transcript_id : NM_178689.3

name	4930506M07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383191 GeneID:71653 MGI:1918903
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930506M07 gene transcript_id : NM_175172.3

name	Vax1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678556 GeneID:22326 MGI:1277163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ventral anterior homeobox containing gene 1 transcript_id : NM_009501.1

name	Kcnk18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131054 GeneID:332396 MGI:2685627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel, subfamily K, member 18 transcript_id : NM_207261.3

name	Slc18a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353800 GeneID:214084 MGI:106677
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 18 (vesicular monoamine), member 2 transcript_id : NM_172523.2

name	Pdzd8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368577 GeneID:107368 MGI:2677270
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PDZ domain containing 8 transcript_id : NM_001033222.2

name	LOC100043073 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270529 GeneID:100043073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100043073 transcript_id : XM_001479446.1

name	Trub1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312414 CCDS:CCDS29926.1 GeneID:72133 MGI:1919383
definition	GO_function : GO:0004730 - pseudouridylate synthase activity [Evidence IEA] GO_process : GO:0006396 - RNA processing [Evidence IEA]; GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : TruB pseudouridine (psi) synthase homolog 1 isoform 1 protein_id : NP_082391.1

name	Trub1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23943926 CCDS:CCDS29927.1 GeneID:72133 MGI:1919383
definition	GO_function : GO:0004730 - pseudouridylate synthase activity [Evidence IEA] GO_process : GO:0006396 - RNA processing [Evidence IEA]; GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2 product : TruB pseudouridine (psi) synthase homolog 1 isoform 2 protein_id : NP_084115.1

name	LOC100043038 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270528 GeneID:100043038
definition	codon_start : 1 product : similar to Sm protein G protein_id : XP_001479440.1

name	Atrnl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56699442 CCDS:CCDS29928.1 GeneID:226255 MGI:2147749
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IPI] codon_start : 1 exception : mismatches in translation note : attractin-like protein product : attractin-like 1 protein_id : NP_852080.2

name	Gfra1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753976 GeneID:14585 MGI:1100842
definition	GO_component : GO:0019898 - extrinsic to membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence TAS] GO_process : GO:0009653 - morphogenesis [Evidence TAS]; GO:0007399 - nervous system development [Evidence IMP]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence TAS] codon_start : 1 note : GDNFR-alpha; GFR alpha-1 product : glial cell line derived neurotrophic factor family receptor alpha 1 protein_id : NP_034409.1

name	1700011F14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037425 GeneID:75645 MGI:1922895
definition	codon_start : 1 product : hypothetical protein LOC75645 protein_id : NP_083648.1

name	Pnlip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674236 CCDS:CCDS29930.1 GeneID:69060 MGI:97722
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004806 - triacylglycerol lipase activity [Evidence IEA] GO_process : GO:0030299 - cholesterol absorption [Evidence IMP]; GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 product : pancreatic triglyceride lipase protein_id : NP_081201.2

name	Pnliprp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9256628 CCDS:CCDS29931.1 GeneID:18946 MGI:97723
definition	codon_start : 1 product : pancreatic lipase related protein 1 protein_id : NP_061362.1

name	Pnliprp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755118 GeneID:18947 MGI:1336202
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004806 - triacylglycerol lipase activity [Evidence IEA] GO_process : GO:0006968 - cellular defense response [Evidence IMP]; GO:0007586 - digestion [Evidence IMP]; GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : pancreatic lipase-related protein 2 protein_id : NP_035258.1

name	1700019N19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385716 GeneID:67507 MGI:1914757
definition	codon_start : 1 product : hypothetical protein LOC67507 protein_id : NP_080484.1

name	Hspa12a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28461135 GeneID:73442 MGI:1920692
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006457 - protein folding [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : heat shock 70kDa protein 12A product : heat shock protein 12A protein_id : NP_780408.1

name	6430537H07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520085 GeneID:226265 MGI:2441717
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC226265 protein_id : NP_848804.1

name	4930506M07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424776 GeneID:71653 MGI:1918903
definition	codon_start : 1 product : hypothetical protein LOC71653 protein_id : NP_780381.1

name	Vax1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678557 CCDS:CCDS29933.1 GeneID:22326 MGI:1277163
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0031490 - chromatin DNA binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IMP] [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0001747 - eye development (sensu Mammalia) [Evidence IGI]; GO:0007406 - negative regulation of neuroblast proliferation [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0007399 - nervous system development [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : ventral anterior homeobox containing gene 1 protein_id : NP_033527.1

name	Kcnk18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402279 CCDS:CCDS29934.1 GeneID:332396 MGI:2685627
definition	GO_component : GO:0005886 - plasma membrane [Evidence IC] GO_function : GO:0015269 - calcium-activated potassium channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IDA] codon_start : 1 note : TWIK-related spinal cord K+ channel; TWIK-related individual K+ channel product : 2P K ion channel TRESK protein_id : NP_997144.1

name	Slc18a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369732 CCDS:CCDS29935.1 GeneID:214084 MGI:106677
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : vesicular monoamine transporter 2 product : solute carrier family 18 (vesicular monoamine), member 2 protein_id : NP_766111.1

name	Pdzd8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677508 CCDS:CCDS29936.1 GeneID:107368 MGI:2677270
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : mismatches in translation product : PDZ domain containing 8 protein_id : NP_001028394.1

name	LOC100043073 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270530 GeneID:100043073
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479496.1

name	LOC668627 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668627
definition	number : 1 pseudo : _no_value

name	LOC100043503 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270581 GeneID:100043503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to ribosomal protein L30 pseudo : _no_value transcript_id : XR_034811.1

name	LOC668626 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270582 GeneID:668626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 985 ESTs, 2 Proteins product : similar to eukaryotic translation elongation factor 1 gamma pseudo : _no_value transcript_id : XR_034819.1

clone name	MSMg01-079K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489P15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-338H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528E16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-502P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477P18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-469F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154M02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-333L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293A16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-447M03.T7 (MSMg01no447_m03.b1)	MSMg01-447M03.TJ (MSMg01no447_m03.g1)
ACC	AG536134	AG536135
length	758	811
length of high quality (start - end)	477 (52 - 528)	---
definition	CHROMAT_FILE: MSMg01no447_m03.b1 PHD_FILE: MSMg01no447_m03.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:16:45 2005	CHROMAT_FILE: MSMg01no447_m03.g1 PHD_FILE: MSMg01no447_m03.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:16:46 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NCCCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGC GCGGAATTCCTTCTTCTTGCAGCTGCTGGCAAGCCAGCTGCACAAATCCA TCGTGAAAATGACATTTATGCCTTATGATTTGTGTGTGGCCAGTGAATAA TAGCTCACAGGTTTGGAAGAATCTTAAACGGCCAGGCAAACTTCTTTTTT TCTTAAAAGGGCACTTAGTGGGGTGTGAGCTGCAGTGACCACTCTGGCTG CACACGGATGAGCCCTCTCAGGTTATGGTCCATTCACGGCACAGAGGAGA TTGATGAAGGGTCTTGAGCTCCTCCCCCTCCCCCTCCCTCTCCTCTTCTT CCTCCTCCTCCCCCTCTTCCTCCTCTTCTTCATCCTCCTCCTCTTTTCCT TCTCCTCCTCCTCCTCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTT CCATATAATGACCATTTTATTATAGAAGAATTCAACTGCACATTTACTTT GGATACACCACAACCATGGTGTGAGACAACGGTGAGAGGCAAATTGGCTA CCCAGGACTCCTGAGAGTAGGTGGCTTATAAACTGCTGCCTCCATGTGTC TTCTGTCTAACAGTCGCTCGGTTAGCCTCCACACAGCACCCTGTATTCCA GTTATTCCAACATTTTTGTTCAGTCTACCCATGGTGATGGTGAAGGTTTT GTGAAACATTTTACCCTCCCCCCGGTATGAATTAATGTTTTGCTTAATTA TCTCTGCN	TGGGAAGCCTGGAGACGCTGGCTGCGAAATATAGGGGACCTAAAAAATGT TCCCGGAATCCTTTCCCCAAGGAAACCCCCCGAGAGGCCCGGAGAAAGAG GAGACAAAAACCTTGGGGAAAAGGGGGCTTTTCCCCCCAAAAAAAGGGGG GGCCCCGGAGAGCCCCAGGGCCACCCCGCAAACCCCTTCTTGGGGGAAAA AAAAAACGGCGAAAGGAGGGACCGCGGGGGAAAAAATTTTTTTGGGGGAA AACACCTCCGGGGGGGCGGCATTTTTCTCCCCCTGCGGGGGGAAAAAAAC CACCCCCTTTTTTTTTTGGGCGGAACCTCTTTCCCTCGCGGTCCCCCCAC ACTATCTCTCCGGGGGGCCGAGGGGGGGCCTCTACCTCGGCGGCGGTGTT CTTGTACGCGCCCCCTTCTCGTCCCTCTCTCACTGCTTCACCCATCAACG ACCAGCTGTTTCCGCTCCCTCTGCTCCTACCCCCGCGGCTCCTCGCGTCC TCCCTCCTCCTCTACTCCCCCCCCGTCAATGCCTCCCCGCGCCCATCCCT AACGTCGTATCCATCCCTACCCTCCCTGATCTCTTCGTCTGCCTTCTCAC GGCATCCTCTATCCTTTCCTCTCATACCTATCTCCGAGTTTCCCCAGTAC CAGTTTGCTTCCCCGCCTATTTCGTCCGCCATTAACTTTTCTCTCTCACC CCGCCATCTTCCGTTGAGATCGGGCGACACCGCGGTAGTCCTACGGCTCC AATGTTCGCTACCTGCCCACGTAAATCCTTCCCAATTTCCTAGCTTTCTA CGCCCCCTTCG
quality values	Open. Hide. 0 3 8 8 6 8 8 8 8 10 18 21 19 28 22 30 30 32 27 31 37 21 24 16 16 18 27 30 48 30 28 28 25 23 21 21 9 9 9 15 11 10 10 12 10 8 8 8 8 8 8 19 30 30 30 28 28 31 31 59 47 47 33 25 11 11 11 11 11 11 11 11 11 21 20 31 28 32 32 34 48 48 53 53 53 53 53 53 57 59 53 53 53 53 53 53 50 50 42 42 42 51 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 54 54 57 57 57 68 57 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 57 57 57 50 50 50 50 50 50 68 68 50 57 57 57 57 57 57 59 68 57 59 59 57 57 57 57 50 50 51 50 50 50 59 54 54 57 59 59 57 57 57 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 68 68 59 59 59 57 57 57 59 59 59 59 59 59 59 57 68 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 59 59 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 52 52 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 44 41 43 41 31 31 31 31 27 35 35 42 43 59 59 59 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 59 59 59 59 57 59 59 68 68 68 68 68 59 59 59 59 59 59 59 59 57 57 54 54 54 57 57 57 54 57 57 59 59 59 59 68 68 59 59 54 57 57 57 57 57 57 57 57 54 54 54 57 59 59 57 57 57 59 59 57 59 59 59 59 57 59 57 57 57 59 59 59 59 59 59 57 57 54 57 54 54 57 57 48 48 57 57 57 57 48 48 48 48 48 46 57 57 57 57 57 57 57 57 57 57 48 48 48 48 48 57 59 59 59 59 48 48 48 37 37 37 37 34 34 28 25 24 20 18 15 17 24 30 26 26 35 39 28 33 31 32 28 25 25 25 33 33 24 24 24 27 19 17 17 20 28 28 34 34 37 21 18 14 10 10 13 21 30 28 28 28 24 24 20 23 23 23 13 11 11 11 13 18 27 31 18 19 14 10 10 12 16 12 11 15 14 19 19 19 13 16 11 11 11 10 10 13 15 19 23 12 12 8 10 10 8 8 8 10 8 9 12 14 14 10 15 22 23 12 12 12 22 23 27 12 10 10 20 17 16 9 8 8 8 8 10 10 10 10 13 13 10 10 10 10 8 11 8 6 6 6 7 11 8 10 17 13 8 6 6 6 6 6 8 8 8 6 6 8 8 8 8 8 11 12 12 12 8 8 6 6 8 8 10 10 15 12 12 12 11 8 8 6 6 8 8 8 8 8 8 9 9 17 17 11 8 8 8 8 8 8 8 8 8 10 9 8 8 8 8 12 11 10 8 10 12 9 9 9 12 10 9 9 13 8 7 8 6 6 8 8 8 6 7 8 8 8 8 8 10 11 11 10 10 10 10 12 11 12 12 11 13 13 10 10 10 10 10 10 10 11 11 12 12 12 12 10 10 10 10 10 10 10 11 11 8 8 8 8 6 6 6 8 3 0	Open. Hide. 7 7 8 8 8 10 10 11 9 6 6 6 6 6 8 9 11 6 6 6 8 8 8 8 7 7 7 8 7 8 8 8 8 8 16 11 15 8 8 8 8 8 8 14 14 15 9 9 9 11 14 11 12 8 8 8 8 12 9 10 11 11 8 8 8 9 8 7 7 6 6 6 6 16 11 10 10 11 21 15 13 6 6 6 6 6 8 6 7 7 9 8 8 8 8 8 9 10 8 8 8 8 8 8 8 8 8 8 8 8 6 8 6 8 8 13 8 11 10 13 14 16 16 14 15 10 8 11 8 8 9 16 15 17 20 19 15 10 9 9 9 9 9 12 11 12 11 16 16 11 10 10 14 15 10 10 6 6 8 8 8 8 8 8 8 8 9 12 11 11 6 7 7 9 10 13 8 8 8 8 8 8 10 12 12 12 11 11 10 10 12 14 18 15 12 10 10 10 10 13 25 26 35 19 22 10 10 9 9 10 12 11 10 8 8 8 8 11 12 9 9 9 9 9 9 9 10 8 8 9 9 10 8 10 13 14 14 14 19 20 28 15 12 10 9 9 8 8 8 8 6 10 7 7 7 7 6 10 6 6 8 8 12 12 13 9 9 8 8 8 8 9 12 18 8 8 8 12 13 13 15 12 9 8 8 8 8 12 14 14 9 10 10 16 15 12 18 15 12 12 11 10 9 13 10 10 9 10 11 13 14 18 20 31 12 11 9 9 8 8 8 8 8 8 8 8 8 6 6 8 8 8 9 12 8 10 10 8 8 8 10 10 12 19 17 9 6 8 6 6 8 8 8 9 9 8 11 9 8 8 8 9 9 10 12 10 6 8 8 6 8 8 8 11 13 10 10 12 13 7 8 6 6 8 8 10 12 8 8 10 10 11 10 12 12 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 16 10 10 11 11 13 10 9 8 8 8 8 9 8 8 8 8 8 8 9 12 10 10 10 10 9 9 9 12 12 12 10 9 9 8 8 8 8 10 10 10 11 13 11 11 11 12 12 12 10 9 9 12 9 8 10 10 8 8 8 8 8 8 15 16 13 11 11 8 10 6 6 8 8 8 8 10 9 9 9 9 9 10 10 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 6 8 6 6 8 7 14 18 13 17 9 9 9 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 11 11 8 8 8 8 8 8 8 8 9 9 9 9 8 10 8 8 8 8 8 8 6 6 8 8 7 7 8 8 19 18 10 8 8 8 8 8 8 7 7 8 8 6 6 8 8 8 8 8 8 6 6 8 8 6 6 6 6 8 8 10 8 8 8 8 8 10 9 9 9 9 9 11 11 9 8 10 10 10 8 8 6 6 8 8 9 9 9 9 11 12 16 12 11 11 11 8 8 6 6 8 10 10 6 6 8 6 8 8 8 8 11 10 13 18 13 12 12 10 10 8 8 8 6 8 6 7 8 8 8 9 8 8 8 10 10 8 8 8 11 11 20 15 8 8 8 8 8 9 11 11 11 12 10 13 10 10 8 10 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 8 10 7 7 7 8 8 8 10 8 8 8 8 11 11 8 9 9 9 9 9 10 10 13 14 10 10 10 10 11 10 10 8 8 10 11 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 13 12 8 8 8 8 11 12 9 8 10 7 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no447_m03.b1 MSMg01no447_m03.b1 CHROMAT_FILE:
MSMg01no447_m03.b1 PHD_FILE: MSMg01no447_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:45 2005
         (477 letters)



>mm_chr19_58477478_58478355
          Length = 878

 Score =  619 bits (320), Expect = 0.0
 Identities = 425/476 (89%), Gaps = 33/476 (6%)
 Strand = Plus / Minus

                                                                       
Query: 3   gaattccttcttcttgcagctgctggcaagccagctgcacaaatccatcgtgaaaatgac 62
           |||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gaattccttcttcagggagctgctggcaagccagctgcacaaatccatcgtgaaaatgac 409

                                                                       
Query: 63  atttatgccttatgatttgtgtgtggccagtgaataatagctcacaggtttggaagaatc 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atttatgccttatgatttgtgtgtggccagtgaataatagctcacaggtttggaagaatc 349

                                                                       
Query: 123 ttaaacggccaggcaaacttc-tttttttcttaaaagggcacttagtggggtgtgagctg 181
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ttaaacggccaggcaaacttcttttttttcttaaaagggcacttagtggggtgtgagctg 289

                                                                       
Query: 182 cagtgaccactctggctgcacacggatgagccctctcaggttatggtccattcacggcac 241
           ||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||
Sbjct: 288 cagtgacaactctggctgcacacagatgagccctctcaggttatggtccattcaagtcac 229

                                                                       
Query: 242 agaggagattgatgaagggtcttgagctcctccccctccccctccctctcctcttcttcc 301
           |||||  |||||||||||||||||||||||| |||||     |||| |||||||||||||
Sbjct: 228 agaggttattgatgaagggtcttgagctcct-cccct-----tccc-ctcctcttcttcc 176

                                                                       
Query: 302 tcctcctccccctcttcctcctcttcttcatcctcctcctcttttccttctcctcctcct 361
           |         |||||   |||||||||         ||||||| ||||||||||||||||
Sbjct: 175 t---------cctct---tcctcttct---------tcctcttctccttctcctcctcct 137

                                                                       
Query: 362 cctctccctcctcctcctcctcctcctcctccttctttccatataatgaccattttatta 421
           | |||   | || |||||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 136 cttct---t-cttctcctcctcctcctcctccttccttccatatactggccattttatta 81

                                                                   
Query: 422 tagaagaattcaactgcacatttactttggatacaccacaaccatggtgtgagaca 477
           ||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 80  tagaagagttcagctgcacatttactttggacacaccacaaccatggtgtgagaca 25


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 878
Length adjustment: 10
Effective length of query: 467
Effective length of database: 868
Effective search space:   405356
Effective search space used:   405356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information