Query= MSMg01no450_c22.b1 MSMg01no450_c22.b1 CHROMAT_FILE:
MSMg01no450_c22.b1 PHD_FILE: MSMg01no450_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:00 2005
(434 letters)
>mm_chr19_17373931_17374765
Length = 835
Score = 663 bits (343), Expect = 0.0
Identities = 412/435 (94%), Gaps = 1/435 (0%)
Strand = Plus / Minus
Query: 1 caaagg-aaaaaaagcataataaaaatattcatttttctccctgaatatccagaaaaagc 59
|||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 635 caaaggaaaaaaaagcacaataaaaatattcatttttctccctgaaaatccagaaaaagc 576
Query: 60 caaagaagtaaagatcattgtacagtggatattgctgtaagtgtcgtgtgtttagtctga 119
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 575 caaagaagtaaagatcattgtacagtggatattgctgtaagtgtcatgtgtttagtctga 516
Query: 120 tataatcctcatgcattcatgctttaaatatttgttcaaaagctggagacactccttaag 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aataatcctcatgcattcatgctttaaatatttgttcaaaagctggagacactccttaag 456
Query: 180 aggctgcggatcctctaggaaatagggcctccatagtagagagaggtcaccagagatagg 239
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aggctgtggatcctctaggaaatagggcctccatagtagagagaggtcaccagagatagg 396
Query: 240 ccttgcaaggttgttttctaggccctgggcccggggcctgatgccctctgcttctatctg 299
|||||||||||||| || |||||| ||||| |||||||| || |||||||||||||||
Sbjct: 395 ccttgcaaggttgtcacctgggccctaggccctgggcctgacgctctctgcttctatctg 336
Query: 300 tcctaatgtgaagagtctcgcaatcccaccatcagggaaccactcctcacggccttcctt 359
|| | |||||||||| |||| ||||||||||||||||| || ||||||| ||||||||||
Sbjct: 335 tcttgatgtgaagagcctcgaaatcccaccatcagggagccgctcctcaaggccttcctt 276
Query: 360 gctgcagtggcgtgaaactctctaaaatcatgaggcaaactaaacatcctctctcctgag 419
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 275 gctgcagtggcatgaaactctctaaaatcatgaggcaaactaaacatcgtctctcctgag 216
Query: 420 ctgttcctgtcagct 434
|||||||||||||||
Sbjct: 215 ctgttcctgtcagct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 835
Length adjustment: 9
Effective length of query: 425
Effective length of database: 826
Effective search space: 351050
Effective search space used: 351050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_c22.g1 MSMg01no450_c22.g1 CHROMAT_FILE:
MSMg01no450_c22.g1 PHD_FILE: MSMg01no450_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:01 2005
(447 letters)
>mm_chr19_17195493_17196339
Length = 847
Score = 818 bits (423), Expect = 0.0
Identities = 441/447 (98%)
Strand = Plus / Plus
Query: 1 cttcttcagatgcatttgaacaccaagacatctccagtgcatctggcaaaatcagctctc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 cttcttcagatgcatttgaacaccaagacatctccagtgcatcaggcaaaatcagctctc 260
Query: 61 tttcagtcacctccagtcctcagagtgaggaaccaggggaggccttagaagtcaagaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 tttcagtcacctccagtcctcagagtgaggaaccaggggaggccttagaagtcgagaagg 320
Query: 121 agcctttcattctagactcccttgctgtgcaaacagagacattcacatgggatttgcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcctttcattctagactcccttgctgtgcaaacagagacattcacatgggatttgcaaa 380
Query: 181 gcaaagacacccatgaagaatctctagtggatcatagaaatttaggtgaagccaacacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaaagacacccatgaagaatctctagtggatcatagaaatttaggtgaagccaacacaa 440
Query: 241 cattggatatttttaatccaatgaaaaacaggcccttatctggaatggaacttgagaaaa 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattggataggattaatccaatgaaaaacaggcccttatctggaatggaacttgagaaaa 500
Query: 301 ctgaagcctgtaccattctgaagccagaaagagcaaatggaacactactttatgaatctt 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 ctgaagcctgtaccattctgaagccagaaagagcaaatggaaaactactttatgaatctt 560
Query: 361 ctcaagactttggtgtttgggatggcccgatggatagtgatgtgtgggatagtcatataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcaagactttggtgtttgggatggcccgatggatagtgatgtgtgggatagtcatataa 620
Query: 421 gttatgagacagctatgaattctacag 447
|||||||||||||||||||||||||||
Sbjct: 621 gttatgagacagctatgaattctacag 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
