Query= MSMg01no450_g12.b1 MSMg01no450_g12.b1 CHROMAT_FILE:
MSMg01no450_g12.b1 PHD_FILE: MSMg01no450_g12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:19 2005
(179 letters)
>mm_chr19_14027437_14028015
Length = 579
Score = 337 bits (174), Expect = 3e-97
Identities = 179/182 (98%), Gaps = 3/182 (1%)
Strand = Plus / Minus
Query: 1 ccccattttttaataggattatttgattttctggagt---ccttcttgaattcttaagta 57
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 455 ccccattttttaataggattatttgattttctggagtccaccttcttgaattcttaagta 396
Query: 58 taattcttaagattagggataatatattgtctgggtttatgtttactgtttgtttttatg 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 taattcttaagattagggataatatattgtctgggtttatgtttactgtttgtttttatg 336
Query: 118 ttagtgtttgtgctagagtagggaaaatgctttggtttagggttagggttaaagatatca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttagtgtttgtgctagagtagggaaaatgctttggtttagggttagggttaaagatatca 276
Query: 178 tt 179
||
Sbjct: 275 tt 274
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_g12.g1 MSMg01no450_g12.g1 CHROMAT_FILE:
MSMg01no450_g12.g1 PHD_FILE: MSMg01no450_g12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:19 2005
(297 letters)
>mm_chr19_13868625_13869321
Length = 697
Score = 574 bits (297), Expect = e-168
Identities = 297/297 (100%)
Strand = Plus / Plus
Query: 1 cctgggaatgattcatttatataataaatttgcactgaatagtttttatttttgatgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgggaatgattcatttatataataaatttgcactgaatagtttttatttttgatgatt 260
Query: 61 tatttgttatgtacaggtaataataaaatattatgttcttatgtcatctattgtccaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttgttatgtacaggtaataataaaatattatgttcttatgtcatctattgtccaatt 320
Query: 121 gtgaatatagataaataacacacacataaaacattctcataattcaaatgttgacaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgaatatagataaataacacacacataaaacattctcataattcaaatgttgacaagaa 380
Query: 181 gtacataaaaaaaataggtcagaagtaaagatggggtgtttcagtacaattttgagttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtacataaaaaaaataggtcagaagtaaagatggggtgtttcagtacaattttgagttca 440
Query: 241 agaaagcctgccaaaatgagtgatgtttcagaaaaaaataaaacaaaaggtgaaata 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaagcctgccaaaatgagtgatgtttcagaaaaaaataaaacaaaaggtgaaata 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
