Query= MSMg01no456_b10.b1 MSMg01no456_b10.b1 CHROMAT_FILE:
MSMg01no456_b10.b1 PHD_FILE: MSMg01no456_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:47 2005
(518 letters)
>mm_chr19_28526100_28527016
Length = 917
Score = 907 bits (469), Expect = 0.0
Identities = 497/513 (96%), Gaps = 14/513 (2%)
Strand = Plus / Plus
Query: 6 aattctaggtgacctgccaaacccacccagcatctgtgtggggatctggagtctgagctc 65
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 207 aattctaggtgacctgccaaacccacccagcatctgtgtgggg-tctggagtctgagctc 265
Query: 66 cagtccttgtttgtacagaaaccgttttaaccactgagccatctacctccctaggacaag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cagtccttgtttgtacagaaaccgttttaaccactgagccatctacctccctaggacaag 325
Query: 126 actatttctaaaggccaaattgtcctacactctaaagacacatcagagtaaagatcagtt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 actatttctaaaggccaaattgtcctacactctaaagacacatcagagtaaagatcagtt 385
Query: 186 tcaaagttaaagcgcatttaccaatgtggatttttttcctcctgttcaaggtaccagagg 245
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 386 tcaaagttaaagcgcatttaccaatgtggattttttttctcctgttcaaggtaccagagg 445
Query: 246 aaaacaaggcgaatgacaagaatatcatgtggtgagcaggctctatgaacatcctctcaa 305
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aaaacaaggcgaatgaca-gaatatcatgtggtgagcaggctctatgaacatcctctcaa 504
Query: 306 tgaatcctcacacactctcttcaagataagccttgctactctttcatgaaagagagagct 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgaatcctcacacactctcttcaagataagccttgctactctttcatgaaagagagagct 564
Query: 366 taaatgctttacagctgggaagaaccaggcctagattcaagcatgggtctgactctgtac 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaatgctttacagctgggaagaaccaggcctagattcaagcatgggtctgactctgtac 624
Query: 426 tctgtaagttctcaggattaagagtacggaatcacacacacacatacacacacacacaca 485
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 625 tccgtaagttctcaggattaagagtacggaatcacacacacaca--cacacacacacaca 682
Query: 486 cacactctgaaagagagagagagagagacagag 518
|| |||||||||||||||||||||
Sbjct: 683 ca----------gagagagagagagagacagag 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 917
Length adjustment: 10
Effective length of query: 508
Effective length of database: 907
Effective search space: 460756
Effective search space used: 460756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_b10.g1 MSMg01no456_b10.g1 CHROMAT_FILE:
MSMg01no456_b10.g1 PHD_FILE: MSMg01no456_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:47 2005
(117 letters)
>mm_chr19_28586451_28586967
Length = 517
Score = 223 bits (115), Expect = 4e-63
Identities = 115/115 (100%)
Strand = Plus / Minus
Query: 1 tctgctttaaggtctcatgttccagaaggtatcagtcttcttgcagcaggtgattagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tctgctttaaggtctcatgttccagaaggtatcagtcttcttgcagcaggtgattagttt 256
Query: 61 tgtaccctcagagtttaggtgacaagggttgggtggtgattaggatagtgtttgg 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgtaccctcagagtttaggtgacaagggttgggtggtgattaggatagtgtttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 117
Length of database: 517
Length adjustment: 8
Effective length of query: 109
Effective length of database: 509
Effective search space: 55481
Effective search space used: 55481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
