Query= MSMg01no457_g17.b1 MSMg01no457_g17.b1 CHROMAT_FILE:
MSMg01no457_g17.b1 PHD_FILE: MSMg01no457_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:37 2005
(511 letters)
>mm_chr19_59637627_59638537
Length = 911
Score = 886 bits (458), Expect = 0.0
Identities = 461/462 (99%)
Strand = Plus / Minus
Query: 1 tcttaacgtagcactcttaaacatgtatggtcccaaaaatagagcttgaaaactaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tcttaacgtagcactcttaaacatgtatggtcccaaaaatagagcttgaaaactaacaaa 403
Query: 61 aaaggtatatcgacttagaattttacatgctacatcagtacttctatctgtaattaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aaaggtatatcgacttagaattttacatgctacatcagtacttctatctgtaattaataa 343
Query: 121 acagtagctataaaagcataagtatatgtaaaccctatctgtcaaataaacccaactgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 acagtagctataaaagcataagtatatgtaaaccctatctgtcaaataaacccaactgaa 283
Query: 181 aaacttgaagcatagtagcccaacagagcagaacactgttgttttacatgtgtggggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaacttgaagcatagtagcccaacagagcagaacactgttgttttacatgtgtggggaaa 223
Query: 241 gtgtggggtggggggcacataagtatcacagtaagtatatggagttcccagaacaattca 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gcgtggggtggggggcacataagtatcacagtaagtatatggagttcccagaacaattca 163
Query: 301 cagaattttgtccttttattttaccatgtgggtcctagagtttgaacttggatcatcaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cagaattttgtccttttattttaccatgtgggtcctagagtttgaacttggatcatcaag 103
Query: 361 cttggtggcaaagacctttgagccatctcctataccaaagaacatattttaagagcatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 cttggtggcaaagacctttgagccatctcctataccaaagaacatattttaagagcatag 43
Query: 421 tcaaacttaaatgtacattcccaaagatagactattcaaagc 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tcaaacttaaatgtacattcccaaagatagactattcaaagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_g17.g1 MSMg01no457_g17.g1 CHROMAT_FILE:
MSMg01no457_g17.g1 PHD_FILE: MSMg01no457_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:37 2005
(435 letters)
>mm_chr19_59527295_59528129
Length = 835
Score = 801 bits (414), Expect = 0.0
Identities = 428/438 (97%), Gaps = 10/438 (2%)
Strand = Plus / Plus
Query: 1 cagaaaggagaggcgactgctcagaatagcattctagagggcattctgttgtctattaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaaaggagaggcgactgctcagaatagcattctagagggcattctgttgtctattaca 260
Query: 61 tctagcaatcctttattttccaggtggagatccattctcctctgtggggttctggtcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctagcaatcctttattttccaggtggagatccattctcctctgtggggttctggtcaaa 320
Query: 121 agcagttggggacaaagctactagagagcccaggaaagtgcctgaaaacccccctccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcagttggggacaaagctactagagagcccaggaaagtgcctgaaaacccccctccatc 380
Query: 181 ccctccacatcctggacctatgtgtgtcttggaagggcagctttgggatgactggagggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctccacatcctggacctatgtgtgtcttggaagggcagctttgggatgactggagggg 440
Query: 241 gtggggatttttc-----tatttcatttccttctggaaagtcacctgggcaagcctgtcc 295
||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgggga-----cagagctatttcatttccttctggaaagtcacctgggcaagcctgtcc 495
Query: 296 atggtccctggctcctgcatccttgtgtgtgagaacatctgttttccctgccttgtttag 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atggtccctggctcctgcatccttgtgtgtgagaacatctgttttccctgccttgtttag 555
Query: 356 ccataatctcttatttgaaggcagctgatggagaaagaaacgatgacatccctccccctt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ccataatctcttatttgaaggcagctgatggagaaagaaacgatgacatccctccccctt 615
Query: 416 tgattatttctttgcttt 433
||||||||||||||||||
Sbjct: 616 tgattatttctttgcttt 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
