Query= MSMg01no461_g02.b1 MSMg01no461_g02.b1 CHROMAT_FILE:
MSMg01no461_g02.b1 PHD_FILE: MSMg01no461_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:57 2005
(242 letters)
>mm_chr19_13609267_13609908
Length = 642
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%)
Strand = Plus / Minus
Query: 1 tgataagataaaggtgatcagcagaacttcattgctaaccacaactggaaaagcatgagc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgataagatataggtgatcagcagaacttcattgctaaccacaactggaaaagcatgagc 383
Query: 61 tatttatgccttattccagatttctagttctatcataaatattattaaaacaatccacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tatttatgccttattccagatttctagttctatcataaatattattaaaacaatccacct 323
Query: 121 aggactgtttcatcctacttaaaataactgattggcactttaaattttcattgaacatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 322 aggactgtttcatcctacttaaaataactgattggcactttaaattttcattgaatatat 263
Query: 181 aatcattagaaggttcggtgaaacatgcagtcatatttccatatatattacaggcaaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aatcattagaaggttcggtgaaacatgcagtcatatttccatatatattacaggcaaaac 203
Query: 241 ct 242
||
Sbjct: 202 ct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_g02.g1 MSMg01no461_g02.g1 CHROMAT_FILE:
MSMg01no461_g02.g1 PHD_FILE: MSMg01no461_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:57 2005
(345 letters)
>mm_chr19_13440070_13440814
Length = 745
Score = 598 bits (309), Expect = e-175
Identities = 336/349 (96%), Gaps = 8/349 (2%)
Strand = Plus / Plus
Query: 1 attcacttattttttttttctggcactttgcactgagacattaatacaaaagcatataag 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 attcacttattttttttttctggcactttgcactgagacattaatacaaaattatataag 260
Query: 61 tatacaaagaagcttttagggaaaagatatgcatgtgggtattctttagtgaaagacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatacaaagaagcttttagggaaaagatatgcatgtgggtattctttagtgaaagacact 320
Query: 121 ctggatattagaaaattttcagagttaaatgaaatacggcttctctggaagttattatta 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 ctggatattagaaaattttcagagttaaatgaaatacggcttctctggatgttattatta 380
Query: 181 tctactaatttgactgaaatcagattattccatgtaattcatgagacatttgcttatcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 tctactaatttgactgaaatcagattattccatgtaattcatgagacatttgcttattta 440
Query: 241 tgtta----ttttttggttctcaaaaataccttgtacttgccacagaagatttataacaa 296
||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttaaaaata----ggttctcaaaaataccttgtacttgccacagaagatttataacaa 496
Query: 297 cttgccctcagtgtttgtggctagtgtcttgtccattttggatttagtg 345
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cttgccctcagtgtttgtggctagtgtcttgtccattttggatttagtg 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
