Query= MSMg01no461_p04.b1 MSMg01no461_p04.b1 CHROMAT_FILE:
MSMg01no461_p04.b1 PHD_FILE: MSMg01no461_p04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:45 2005
(157 letters)
>mm_chr19_24252455_24253011
Length = 557
Score = 275 bits (142), Expect = 1e-78
Identities = 148/150 (98%)
Strand = Plus / Minus
Query: 4 cctggtccttgagataggatcttgctaatttgctcaagctagtctgggtaggtcatgacc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cctggtccttgagataggatcttgctaatttgctcaagctagtctgggtaggtcatgacc 294
Query: 64 ttgaacagctcccttccaagtagctaatcagctaggattacgggcctgactagtttatgt 123
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 293 ttgaacagctcccttccaagcagctaaacagctaggattacgggcctgactagtttatgt 234
Query: 124 gtttgtatttatagttttgtttttcattga 153
||||||||||||||||||||||||||||||
Sbjct: 233 gtttgtatttatagttttgtttttcattga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 557
Length adjustment: 8
Effective length of query: 149
Effective length of database: 549
Effective search space: 81801
Effective search space used: 81801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_p04.g1 MSMg01no461_p04.g1 CHROMAT_FILE:
MSMg01no461_p04.g1 PHD_FILE: MSMg01no461_p04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:45 2005
(322 letters)
>mm_chr19_24063336_24064054
Length = 719
Score = 530 bits (274), Expect = e-155
Identities = 309/322 (95%), Gaps = 3/322 (0%)
Strand = Plus / Plus
Query: 1 tgtgaacagtaggcctggaccacgtagaaagatctcccagggctcactgtcaacacaggc 60
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tgtgaacagtaggcctgggccacgtagaaagatcccccagggctcactgtcaacacaggc 260
Query: 61 gtggatttgtatcaaagtgataattgatgaataaccttgaccattcttaatgagatgctc 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gtggatttgtatcaaagtgataattgatgaatagccttgaccattcttaatgagatgctc 320
Query: 121 tgccaacttccgtccacctttcctagtttttcttaaggcaagctgagaaaaaaaaaaaac 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccaacttccggccacctttcctagtttttcttaaggcaagctgagaaaaaaaaaaaa- 379
Query: 181 aaaatgtaatacctggtttggggactcaaaaccccagcggaggcagaggcagcctttcta 240
|| |||| |||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 380 --aacgtaacacctggtttggggactcaaaaccccagcgggggcagaggcggcctttcta 437
Query: 241 acttgttctgcagtctgagctgacttggctttgcttccagttttcctaccagggaaggtt 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 acttgttctgccttctgagctgacttggctttgcttccagttttcctaccagggaaggtt 497
Query: 301 acagctcactaactgttaatta 322
||||||||||||||||||||||
Sbjct: 498 acagctcactaactgttaatta 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 719
Length adjustment: 9
Effective length of query: 313
Effective length of database: 710
Effective search space: 222230
Effective search space used: 222230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
