Query= MSMg01no462_n22.b1 MSMg01no462_n22.b1 CHROMAT_FILE:
MSMg01no462_n22.b1 PHD_FILE: MSMg01no462_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:01 2005
(525 letters)
>mm_chr19_7360231_7361155
Length = 925
Score = 984 bits (509), Expect = 0.0
Identities = 521/525 (99%)
Strand = Plus / Minus
Query: 1 ttatttgtttacttacttacttacttacttgagatgacctggaagtatttaggaatggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ttatttgtttacttacttacttacttacttgagatgacctggaagtatttaggaatggct 696
Query: 61 cccaccatagcactagcaagcatgcatgctttacccttgtcagctgtcgggtgtgacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 cccaccatagcactagcaagcatgcatgctttacccttgtcagctgtcgggtgtgacaag 636
Query: 121 aatactccaggctttcctggtccttttggcagcctggtctgtgactgtgactctaatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aatactccaggctttcctggtccttttggcagcctggtctgtgactgtgactctaatatt 576
Query: 181 acacctgttctccagacatatatgcatgttatctctgttagcaaggcactcatatttgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 acacctgttctccagacatatatgcatgttatctctgttagcaaggcactcatatttgca 516
Query: 241 ctacctgtatttcagctcattgctgaaagaacttgcaagcatgaccacgagacataggcc 300
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ctacctgtaagtcagctcattgctgaaagaacttgcaagcatgaccacgagacataggcc 456
Query: 301 tactctgaagctttccatagctaccaggatccccagacctacacatcccagctttgtgcc 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 455 tactctgaagctttccatagctcccaggatccccagacctacacatcccagctttgtacc 396
Query: 361 ttcctcctgtccagcctatctgtgctgactgatgctgccctggaagtggagacagcttga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ttcctcctgtccagcctatctgtgctgactgatgctgccctggaagtggagacagcttga 336
Query: 421 aactagagatgactttctggtggctctcccattcctcgccatcctgcctgagccaggatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aactagagatgactttctggtggctctcccattcctcgccatcctgcctgagccaggatc 276
Query: 481 ttagggttctctacgggtgctctgatgcttaccatcttccctccc 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttagggttctctacgggtgctctgatgcttaccatcttccctccc 231
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_n22.g1 MSMg01no462_n22.g1 CHROMAT_FILE:
MSMg01no462_n22.g1 PHD_FILE: MSMg01no462_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:01 2005
(470 letters)
>mm_chr19_7188561_7189430
Length = 870
Score = 874 bits (452), Expect = 0.0
Identities = 464/468 (99%)
Strand = Plus / Plus
Query: 1 accatctagaagaaaatgtgaaccagaggggcagtgcctgaggttgtctgcaggtcccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accatctagaagaaaatgtgaaccagaggggcagtgcctgaggttgtctgcaggtcccca 260
Query: 61 cttgaacatgggtgggcacacgccaagcactccagagccctggcattcgggtccagctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgaacatgggtgggcacacgccaagcactccagagccctggcattcgggtccagctgg 320
Query: 121 tacctgtccctcttccaggcagccttctctggtccttccttgtttctggtctcccttact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacctgtccctcttccaggcagccttctctggtccttccttgtttctggtctcccttact 380
Query: 181 atgtccactcaggctcccctgcgcctctgagcctggactctgtcaagctcaggggctgac 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 atgtccactcaggctcccctgcgcctctgagcctggactctgtctagctcaggggctgac 440
Query: 241 tgtatcatacatggggtgagaggtgtatgccttgccccagttcctagttgctgagcaggc 300
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtagcagacatggggtgagaggtgtatgccttgccccagttcctagttgctgagcaggc 500
Query: 301 tgcatcataggagcgatgcacactgaagaaggtgagcttccccttccactatggccaaca 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 tgcatcataggagcgatgcacactgaagaaggtaagcttccccttccactatggccaaca 560
Query: 361 aggatgctgtccacgtccaggctccacccaatgtggaacagccttgctgttcgaagtgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggatgctgtccacgtccaggctccacccaatgtggaacagccttgctgttcgaagtgct 620
Query: 421 tagctgctgtgcagagcaggagtcccaagggggatgagggatgagcgg 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagctgctgtgcagagcaggagtcccaagggggatgagggatgagcgg 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
