Query= MSMg01no465_e15.b1 MSMg01no465_e15.b1 CHROMAT_FILE:
MSMg01no465_e15.b1 PHD_FILE: MSMg01no465_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:20 2005
(446 letters)
>mm_chr19_45220271_45221116
Length = 846
Score = 427 bits (221), Expect = e-124
Identities = 236/241 (97%)
Strand = Plus / Minus
Query: 204 cctgaacgtgtctttaaggggcaattttgagtgttttcttgcgattctttatttattgtt 263
||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 650 cctgagcgtgtctttaaggggcaattttgagtgttttcttgcgagtgaatatttattgtt 591
Query: 264 tgtgaagggtcaggcactgggtcacatcggaatggtatcaccacaagtgaagcactggca 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tgtgaagggtcaggcactgggtcacatcggaatggtatcaccacaagtgaagcactggca 531
Query: 324 agattgttggaagaggaagaggggttctgagttgtttctgcagtggtcacctggggaggt 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 agattgttggaagaggaagaggggttctgagttgtttctgcagtggtcacctggggaggt 471
Query: 384 gtgcaacagtgagtgtgtaagcaagtgatgtgctcatgggtgcatgtgtgtgcatgaatg 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gtgcaacagtgagtgtgtaagcaagtgatgtgctcatgggtgcatgtgtgtgcatgaatg 411
Query: 444 a 444
|
Sbjct: 410 a 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_e15.g1 MSMg01no465_e15.g1 CHROMAT_FILE:
MSMg01no465_e15.g1 PHD_FILE: MSMg01no465_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:20 2005
(475 letters)
>mm_chr19_45085676_45086550
Length = 875
Score = 905 bits (468), Expect = 0.0
Identities = 474/476 (99%), Gaps = 1/476 (0%)
Strand = Plus / Plus
Query: 1 cctgggactggagttacagacatttgtaagctaccatggaggtgctgggaattgaacgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cctgggactggagttacagacatttgtaagctaccatggaggtgctgggaattgaacgta 259
Query: 61 ggtcctctgaaagagcagccagtactcttaactgctgggccatctcttgagcccctcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggtcctctgaaagagcagccagtactcttaactgctgggccatctcttgagcccctcatt 319
Query: 121 tt-cccactctttccactccttcctgcaccctcagcctttcactcatgtcttttttttct 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttcccactctttccactccttcctgcaccctcagcctttcactcatgtcttttttttct 379
Query: 180 catgccccctctcctttaggcaagccaagaagcagacaatgttctgatcttacaggatag 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cctgccccctctcctttaggcaagccaagaagcagacaatgttctgatcttacaggatag 439
Query: 240 gaaactggtgactgggcctgggaaacggtatctgcaggtgtccaagaatcgctttgatgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaaactggtgactgggcctgggaaacggtatctgcaggtgtccaagaatcgctttgatgg 499
Query: 300 agacgtaggtgtcttcccactggagttcaacaagaattcccttaccttctccatcccacc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agacgtaggtgtcttcccactggagttcaacaagaattcccttaccttctccatcccacc 559
Query: 360 caagagcaaagcccgactcaagaagatcaaggacgacaatggactagtggccaaaaaatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caagagcaaagcccgactcaagaagatcaaggacgacaatggactagtggccaaaaaatc 619
Query: 420 ctcttctggcaaaaaaggggctgcgcaccagaaccctgagatttgcttaggccagg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctcttctggcaaaaaaggggctgcgcaccagaaccctgagatttgcttaggccagg 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
