Query= MSMg01no470_g03.b1 MSMg01no470_g03.b1 CHROMAT_FILE:
MSMg01no470_g03.b1 PHD_FILE: MSMg01no470_g03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:16 2005
(279 letters)
>mm_chr19_15776526_15777206
Length = 681
Score = 487 bits (252), Expect = e-142
Identities = 272/279 (97%), Gaps = 2/279 (0%)
Strand = Plus / Plus
Query: 1 caacaaacaacaatgggataccatatatcgtaattattgcactgatgtacattatccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caacaaacaacaatgggataccatatatcgtaattattgcactgatgtacattatccaaa 260
Query: 61 taattaattgaatattggttgtcaagatattgatgaaacagcctcttaatgttgagcaaa 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taactaattgaatattggttgtcaagatattgatgaaacagcctcttaatgttgagcaaa 320
Query: 121 agaaatatgatgtacctatcaatatatcaacaccttatcaaatatgagtgctctgtaata 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 agaaatatgatgtacctatcaatatatcaacaccttatcaaatatgagtgctctgtgata 380
Query: 181 agtgtattcaagttgctcttcccaagatgctgcaagaacaattctctcaagctccttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgtattcaagttgctcttcccaagatgctgcaagaacaattctctcaagctccttttt 440
Query: 241 gt-anattttttgaa-catcaagtacttcagacgaaata 277
|| | |||||||||| |||| |||| |||||||||||||
Sbjct: 441 gtcatattttttgaaacatcgagtagttcagacgaaata 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 681
Length adjustment: 9
Effective length of query: 270
Effective length of database: 672
Effective search space: 181440
Effective search space used: 181440
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_g03.g1 MSMg01no470_g03.g1 CHROMAT_FILE:
MSMg01no470_g03.g1 PHD_FILE: MSMg01no470_g03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:16 2005
(152 letters)
>mm_chr19_15910119_15910670
Length = 552
Score = 286 bits (148), Expect = 3e-82
Identities = 151/152 (99%)
Strand = Plus / Minus
Query: 1 tgaagaccagaagtggcaactctctgtgaccttggaagcattcgggacatttcattttta 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 352 tgaagaccagaagtggcaactctctgtgaccttggaagcattctggacatttcattttta 293
Query: 61 ttacattttgagacagttttgtctgtcacaaagactcaagaggtgatgggtagggggcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttacattttgagacagttttgtctgtcacaaagactcaagaggtgatgggtagggggcgt 233
Query: 121 gcatatctgtggttggaggtgtgtatacggga 152
||||||||||||||||||||||||||||||||
Sbjct: 232 gcatatctgtggttggaggtgtgtatacggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space: 78336
Effective search space used: 78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
