Query= MSMg01no472_h21.b1 MSMg01no472_h21.b1 CHROMAT_FILE:
MSMg01no472_h21.b1 PHD_FILE: MSMg01no472_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:09 2005
(381 letters)
>mm_chr19_5471521_5472302
Length = 782
Score = 629 bits (325), Expect = 0.0
Identities = 375/413 (90%), Gaps = 34/413 (8%)
Strand = Plus / Plus
Query: 1 taagctggtctcaaactcagagatccacctccttcctatgtgccactaagccaggtattt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 168 taagctggtctcaaactcagagatccacctcgttcctatgtgccactaagccaggtattt 227
Query: 61 ttccttatatttatcttctcttcctt---------------------------------t 87
|||||||||||||||||||||||||| |
Sbjct: 228 ttccttatatttatcttctcttcctttcctttctctctctctctctctctctctctctct 287
Query: 88 ctctctctctctctctctctctctctctttttcttctgccccccg-ccccccattaagct 146
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 288 ctctctctctctctctctctctctctctttttcttctgccccccgcccccccattaagct 347
Query: 147 ttgagattggcctgattggcaatggggaatgaagaaacaacagacaggcataaagaaaac 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ttgagattggcctgattggcaatggggaatgaagaaacaacagacaggcataaagaaaac 407
Query: 207 ccggggaacgggccatgtgttctgagggagacagcagcattctgtaaactcagctgattc 266
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 408 ccggggaacgggccatgtgttctgagggagacagcagcagcctggaaactcagctgattc 467
Query: 267 attatatgagctgaagctaatccttaggggatctctgcaggggagcagtttcaggctaca 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 attatatgagctgaagctaatccttaggggatctctgcaggggagcagtttcaggctaca 527
Query: 327 gtcatctgggctttcaaaatacacatactgtcagcatctgtcctcatggatgg 379
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gtcatctgggctttcaaaatacacatactgtcagcatctgtcctcatggatgg 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 782
Length adjustment: 9
Effective length of query: 372
Effective length of database: 773
Effective search space: 287556
Effective search space used: 287556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_h21.g1 MSMg01no472_h21.g1 CHROMAT_FILE:
MSMg01no472_h21.g1 PHD_FILE: MSMg01no472_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:09 2005
(324 letters)
>mm_chr19_5670424_5671148
Length = 725
Score = 574 bits (297), Expect = e-168
Identities = 319/327 (97%), Gaps = 3/327 (0%)
Strand = Plus / Minus
Query: 1 aaggccagctggacgatgtggaagactctcaaaa-ggggttagggtgggggagctggtta 59
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 332 aaggccagctggacgatgtggaagactctcaaaagggggttagggtgggggagctggtta 273
Query: 60 gatgcttaccatccagaggtcctgcggaagctggacacccttgcgtgacctcggatccca 119
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 272 gatgcttaccatccagaggtcctgcggaagctggacaccctggcgtgacctcggatccca 213
Query: 120 aagccaaagtgagggccttactgagcaatgagtttaacccagtggggagctccagattga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 aagccaaagtgagggccttactgagcaatgagtttaacccagtggggagctccagattga 153
Query: 180 gtgagagtcactgactcaaaactaaggtggagagcaactgaga--gacactcgatggcag 237
|||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 152 gtgagagtcactaactcaaaactaaggtggagagcaactgagaaagacactcgatggcag 93
Query: 238 cctctgttttcccgggcacagacggacacacatcatctgtagacagaagtgattggttgg 297
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 cctctggtcccccgggcacagacggacacacatcatctgtagacagaagtgattggttgg 33
Query: 298 agctttggcattagaatgtgacagagc 324
|||||||||||||||||||||||||||
Sbjct: 32 agctttggcattagaatgtgacagagc 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 725
Length adjustment: 9
Effective length of query: 315
Effective length of database: 716
Effective search space: 225540
Effective search space used: 225540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
