Query= MSMg01no475_h05.b1 MSMg01no475_h05.b1 CHROMAT_FILE:
MSMg01no475_h05.b1 PHD_FILE: MSMg01no475_h05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:14 2005
(291 letters)
>mm_chr19_5202813_5203504
Length = 692
Score = 509 bits (263), Expect = e-148
Identities = 281/287 (97%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 5 tcttctttataatagtgttccctatttagatttttttttttttgagccagggtcctcact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tcttctttataatagtgttccctatttagatttttttttttttgagccagggtcctcact 617
Query: 65 gtgtagtcctgactgacctggagtttgctcggtagactaggttggcctcaggttcacaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gtgtagtcctgactgacctggagtttgctcggtagactaggttggcctcaggttcacaga 557
Query: 125 agtccatctatctctgcctcctgggtgctgggattaattaataaacatatgccatcactt 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 556 agtccatctatctctgcctcctgggtgctgggattaattagtaaacatatgccatcacac 497
Query: 185 ctggcctaggaatccttcattttgatactggttattctacttataaagaatagtgctttc 244
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ctggcctaggaatccttcgttttgatactggttattctacttataaagaatagtgctttc 437
Query: 245 ttattta-ttaatgactgcccacacccttggggcattccgtttcaag 290
||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 436 ttatttatttaatgactgcccacacccttggggcatttcgtttcaag 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 692
Length adjustment: 9
Effective length of query: 282
Effective length of database: 683
Effective search space: 192606
Effective search space used: 192606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_h05.g1 MSMg01no475_h05.g1 CHROMAT_FILE:
MSMg01no475_h05.g1 PHD_FILE: MSMg01no475_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:14 2005
(142 letters)
>mm_chr19_5097709_5098251
Length = 543
Score = 255 bits (132), Expect = 7e-73
Identities = 135/136 (99%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 1 cgcccctgcccaatgactggatgaagcaaggagagggtcaggacctactgacatacccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgcccctgcccaatgactggatgaagcaaggagagggtcaggacctactgacatacccac 260
Query: 61 agacaggcgggggcggtgaaggaaggggggg-ctgccccgggggaaggaagccaacgaca 119
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 agacaggcgggggcggtgaaggaaggggggggctgccccgggggaaggaagccaacgaca 320
Query: 120 agggggtgttgggggg 135
||||||||||||||||
Sbjct: 321 agggggtgttgggggg 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 142
Length of database: 543
Length adjustment: 8
Effective length of query: 134
Effective length of database: 535
Effective search space: 71690
Effective search space used: 71690
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
