Query= MSMg01no475_j03.b1 MSMg01no475_j03.b1 CHROMAT_FILE:
MSMg01no475_j03.b1 PHD_FILE: MSMg01no475_j03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:24 2005
(350 letters)
>mm_chr19_48101743_48102492
Length = 750
Score = 613 bits (317), Expect = e-180
Identities = 340/351 (96%), Gaps = 8/351 (2%)
Strand = Plus / Plus
Query: 4 ggaattctcttca--ttcccc--atgacttctggcacttgccctgcccaaacaagggtga 59
||||||||||||| | | |||||||||||||||||||| ||||||||||||||||
Sbjct: 204 ggaattctcttcaggt----cagatgacttctggcacttgcccggcccaaacaagggtga 259
Query: 60 caatcctaaccttctatttggagtgaactagatgacaccctattagtatagacttgacct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caatcctaaccttctatttggagtgaactagatgacaccctattagtatagacttgacct 319
Query: 120 cttcataaacgagacattataatagtgtgtccttttaggtgaaaaggacacaggcagcca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cttcataaacgagacattataatagtgtgtccttttaggtgaaaaggacacaggcagcca 379
Query: 180 atctaattagaacattaattttcaaattactatgagtgttcatttcacgtgaggacccag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atctaattagaacattaattttcaaattactatgagtgttcatttcacgtgaggacccag 439
Query: 240 agacataatttgaattttgcaaaaggcacacagtcttgtttacttttgtttcttgaaaca 299
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 440 agacataatttgaattttgcaaaaggcacacagtcttgattacttttgtttcttgaaaca 499
Query: 300 attgaatatttcaagtcaaaaaaatatgtttccttctcgttttctcatggt 350
||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 500 attgaatatttcaagccaaaaaaatatgtttccttctcgttttctcatggt 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_j03.g1 MSMg01no475_j03.g1 CHROMAT_FILE:
MSMg01no475_j03.g1 PHD_FILE: MSMg01no475_j03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:24 2005
(206 letters)
>mm_chr19_48259499_48260104
Length = 606
Score = 368 bits (190), Expect = e-106
Identities = 202/206 (98%)
Strand = Plus / Minus
Query: 1 aaggcgactgcaggctgaacacaacgactagagacttccaggcacctttggtgggttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aaggcgactgcaggctgaacacaacgactagagacttccaggcacctttggtgggttctg 347
Query: 61 gaacaggcattataaaagctggcagtaaggtgacccagtttctcttcttgtacctttagc 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaacaggcattataaaagatggcagtaaggtgacccagtttctcttcttgtacctttagc 287
Query: 121 cttaaaggaggaggagaaggttagctcgacagtcctcaaatgattagcaagcttatgtgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 cttaaaggaggaggagaaggttagctcgacagtcctcaaatgattagcaagcttatgtgc 227
Query: 181 ggagttaaggggggggatctaaccca 206
||||||||||||||| |||| |||||
Sbjct: 226 ggagttaagggggggaatctgaccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 606
Length adjustment: 8
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
