Query= MSMg01no477_p18.b1 MSMg01no477_p18.b1 CHROMAT_FILE:
MSMg01no477_p18.b1 PHD_FILE: MSMg01no477_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:35 2005
(666 letters)
>mm_chr14_17889061_17890129
Length = 1069
Score = 1172 bits (606), Expect = 0.0
Identities = 638/650 (98%), Gaps = 5/650 (0%)
Strand = Plus / Plus
Query: 21 gaattctgtactcatgcactgtctccaatgttgttgcttgatgcctgaaagtttgattac 80
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 221 gaattctgtactcatgcattgtctccgatgttgttgcttgatgcctgaaagtttgattac 280
Query: 81 tactgtcagtgggacaaagctctctctggcatttttcttaatagactactattcttaata 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tactgtcagtgggacaaagctctctctggcatttttcttaatagactactattcttaata 340
Query: 141 agctatttttctctagggccagtcagccatctttcaggaactggttagtatgaagtagag 200
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agctattgttctctagggccagtcagccatctttcaggaactggttagtatgaagtagag 400
Query: 201 ggatttgtctcattgcctgaatacttgatgattcaaacaaagccatcctaggagctgcag 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ggatttgtctcattgcctgaatacttgatgattcaaacaaagccatcctaggagctgcag 460
Query: 261 gtgtatctgagttggtaaagcacgtgcctggcctgaatgaagacctggagttccatcttt 320
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gtgtatctgagttggtagagcacgtgcctggcctgaatgaagacctggagttccatcttt 520
Query: 321 agcatcatttatgctggaagtggtgatgttctggggcacagaagaaaaagagtaaagaaa 380
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 521 agcatcatttatgctggaagtggtgatgttctggggcacagaagaataagagtaaagaaa 580
Query: 381 tatgaaaaggtaaaaagtatagaaaaaaagaaaaatatgatgaaaatctggcaatcaaac 440
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 581 tatgaaaaggtaaaaagtatagaaaaaa-gaaaaatatgatgaaaatctggcaatcaaac 639
Query: 441 aaaacaaaacaaggataaata--t--tctatgaatttaaaataaagaaagctcattggtg 496
||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 640 aaaacaaaataaggataaataaataatctatgaatttaaaataaagaaagctcattggtg 699
Query: 497 atagtctcaatgctggcttcccacagtagtattgtatcctttgtaaaggcaggaataaaa 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 atagtctcaatgctggcttcccacagtagtattgtatcctttgtaaaggcaggaataaaa 759
Query: 557 ctgatgggtagaacagagaataactgtgatgagaagaaatctttggaagagcacgggaat 616
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ctgatgggtagaacacagaataactgtgatgagaagaaatctttggaagagcacgggaat 819
Query: 617 gtacacagggtgggaggaaagtagagagttctatttttggttttgacaat 666
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 gtacacagggtgggaggaaagtagagagttctatttttggttttgacaat 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1069
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1059
Effective search space: 694704
Effective search space used: 694704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_p18.g1 MSMg01no477_p18.g1 CHROMAT_FILE:
MSMg01no477_p18.g1 PHD_FILE: MSMg01no477_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:35 2005
(686 letters)
>mm_chr19_58795990_58797075
Length = 1086
Score = 400 bits (207), Expect = e-115
Identities = 358/423 (84%), Gaps = 35/423 (8%)
Strand = Plus / Plus
Query: 284 ctgaaagaacctagtggggaaatgccccactcaattcctgagtcggcgtgcacccaaaaa 343
|||||||||||||||||||||| |||||||| |||| | |||| |||||||||||||
Sbjct: 481 ctgaaagaacctagtggggaaac-ccccactctgttcccaattcggtgtgcacccaaaaa 539
Query: 344 atcacgaaaaagacggtcttgatgtaaacacatgaggtagtttaatgatggagctc-tgg 402
||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 540 -tcacgaagaagaccgtcttgatgtaaacacacgaggtagtttaatgatggagctcctga 598
Query: 403 ttca-acatgtatctcacacaggagataacagatgtctgccctgaggctcaaaagctagg 461
|| ||||| |||||||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct: 599 --cagacatgcatctcacacaggagataacagatgtcggccaggaggctcgaaagctagg 656
Query: 462 -----------tgtttttatagaaa---tagggtctggggctgggggaggaatcagcgca 507
| |||||||||||| || |||||||||||| ||||| | ||
Sbjct: 657 gtttttttttttttttttatagaaaaaata----ctggggctggggaaggaa--a---ca 707
Query: 508 gttacacacaaatgggcaatttaaacatcagaaagcagtatgtaatagtaactctaaagg 567
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 708 gttacacacaaatgggcaatttaaacatcagagagcagtatgtgatagtaactctaaagg 767
Query: 568 gacagtttttatctttgttggcaggacatctggctaaaacccaaaccatatcaacaggtg 627
|| || ||||| || ||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 768 gagggtgtttatgttggttggcaggacatctggctaaaacccaaagcatatcagcaggtg 827
Query: 628 gtccattactcatcttgagcttgtccag-agattgtc----cttgtatgcctttcttatc 682
|||||||||||||||||||||||| || |||||||| |||| ||| ||||||||||
Sbjct: 828 gtccattactcatcttgagcttgtt-aggagattgtctgtccttgcatgtctttcttatc 886
Query: 683 tca 685
|||
Sbjct: 887 tca 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
